PlantSME Plant secondary metabolism enzyme database

Solanum pimpinellifolium (solanum_pimpinellifolium)

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Imported from atlas release summary for Solanum pimpinellifolium.

1183
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 336 19 BAHD (132) View species results
Phenylpropanoid pathway 285 12 POD (112) View species results
Alkaloid pathway 259 23 NMT (38) View species results
Flavonoid pathway 135 12 UFGT (50) View species results
Rosmarinic acid pathway 102 7 4CL (32) View species results
Steroid pathway 66 12 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1280 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 249 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFR
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Gene Pathway Family Confidence Status
solanum_pimpinellifolium_SPIMP01g0008450 Flavonoid IFR low borderline
solanum_pimpinellifolium_SPIMP01g0022840 Flavonoid IFR low borderline
solanum_pimpinellifolium_SPIMP01g0023350 Flavonoid IFR medium pass
solanum_pimpinellifolium_SPIMP01g0033370 Flavonoid IFR low borderline
solanum_pimpinellifolium_SPIMP02g0065000 Flavonoid IFR low borderline
solanum_pimpinellifolium_SPIMP02g0066320 Flavonoid IFR low borderline
solanum_pimpinellifolium_SPIMP03g0090770 Flavonoid IFR high pass
solanum_pimpinellifolium_SPIMP03g0092770 Flavonoid IFR high pass
solanum_pimpinellifolium_SPIMP03g0110210 Flavonoid IFR low borderline
solanum_pimpinellifolium_SPIMP04g0124300 Flavonoid IFR low borderline
solanum_pimpinellifolium_SPIMP04g0142370 Flavonoid IFR low borderline
solanum_pimpinellifolium_SPIMP04g0148220 Flavonoid IFR high pass
solanum_pimpinellifolium_SPIMP05g0155570 Flavonoid IFR low borderline
solanum_pimpinellifolium_SPIMP06g0194000 Flavonoid IFR medium pass
solanum_pimpinellifolium_SPIMP06g0194010 Flavonoid IFR high pass
solanum_pimpinellifolium_SPIMP06g0199880 Flavonoid IFR low borderline
solanum_pimpinellifolium_SPIMP08g0234850 Flavonoid IFR low borderline
solanum_pimpinellifolium_SPIMP08g0238930 Flavonoid IFR low borderline
solanum_pimpinellifolium_SPIMP08g0252200 Flavonoid IFR low borderline
solanum_pimpinellifolium_SPIMP09g0259570 Flavonoid IFR low borderline
solanum_pimpinellifolium_SPIMP09g0263900 Flavonoid IFR low borderline
solanum_pimpinellifolium_SPIMP09g0275910 Flavonoid IFR low borderline
solanum_pimpinellifolium_SPIMP09g0280100 Flavonoid IFR low borderline
solanum_pimpinellifolium_SPIMP10g0301570 Flavonoid IFR low borderline
solanum_pimpinellifolium_SPIMP10g0301940 Flavonoid IFR low borderline
solanum_pimpinellifolium_SPIMP10g0302250 Flavonoid IFR high pass
solanum_pimpinellifolium_SPIMP10g0302280 Flavonoid IFR high pass
solanum_pimpinellifolium_SPIMP12g0358180 Flavonoid IFR low borderline
solanum_pimpinellifolium_SPIMP12g0364130 Flavonoid IFR low borderline