PlantSME Plant secondary metabolism enzyme database

Solanum pimpinellifolium (solanum_pimpinellifolium)

/

Imported from atlas release summary for Solanum pimpinellifolium.

1183
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 336 19 BAHD (132) View species results
Phenylpropanoid pathway 285 12 POD (112) View species results
Alkaloid pathway 259 23 NMT (38) View species results
Flavonoid pathway 135 12 UFGT (50) View species results
Rosmarinic acid pathway 102 7 4CL (32) View species results
Steroid pathway 66 12 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1280 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 249 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CSE
Reset
Gene Pathway Family Confidence Status Best Target
solanum_pimpinellifolium_SPIMP01g0046020 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
solanum_pimpinellifolium_SPIMP01g0048430 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
solanum_pimpinellifolium_SPIMP02g0059350 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
solanum_pimpinellifolium_SPIMP02g0059390 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
solanum_pimpinellifolium_SPIMP02g0064210 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
solanum_pimpinellifolium_SPIMP02g0066840 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
solanum_pimpinellifolium_SPIMP02g0067010 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
solanum_pimpinellifolium_SPIMP02g0067060 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
solanum_pimpinellifolium_SPIMP02g0067080 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
solanum_pimpinellifolium_SPIMP02g0067130 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
solanum_pimpinellifolium_SPIMP02g0075730 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
solanum_pimpinellifolium_SPIMP02g0082940 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
solanum_pimpinellifolium_SPIMP03g0084680 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
solanum_pimpinellifolium_SPIMP03g0085780 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
solanum_pimpinellifolium_SPIMP03g0085790 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
solanum_pimpinellifolium_SPIMP03g0086110 Phenylpropanoid CSE low borderline CSE__00002__sp_Q9C942_CSE_ARATH
solanum_pimpinellifolium_SPIMP03g0092200 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
solanum_pimpinellifolium_SPIMP03g0092220 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
solanum_pimpinellifolium_SPIMP03g0104790 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
solanum_pimpinellifolium_SPIMP03g0107690 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
solanum_pimpinellifolium_SPIMP03g0116640 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
solanum_pimpinellifolium_SPIMP04g0146450 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
solanum_pimpinellifolium_SPIMP04g0148550 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
solanum_pimpinellifolium_SPIMP04g0150390 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
solanum_pimpinellifolium_SPIMP05g0155040 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
solanum_pimpinellifolium_SPIMP05g0158930 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
solanum_pimpinellifolium_SPIMP05g0176650 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
solanum_pimpinellifolium_SPIMP07g0219920 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
solanum_pimpinellifolium_SPIMP07g0219940 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
solanum_pimpinellifolium_SPIMP07g0225540 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
solanum_pimpinellifolium_SPIMP09g0280120 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
solanum_pimpinellifolium_SPIMP09g0281040 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
solanum_pimpinellifolium_SPIMP11g0317040 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
solanum_pimpinellifolium_SPIMP12g0358250 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
solanum_pimpinellifolium_SPIMP12g0360440 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
solanum_pimpinellifolium_SPIMP12g0361490 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL