PlantSME Plant secondary metabolism enzyme database

Solanum pimpinellifolium (solanum_pimpinellifolium)

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Imported from atlas release summary for Solanum pimpinellifolium.

1183
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
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Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 336 19 BAHD (132) View species results
Phenylpropanoid pathway 285 12 POD (112) View species results
Alkaloid pathway 259 23 NMT (38) View species results
Flavonoid pathway 135 12 UFGT (50) View species results
Rosmarinic acid pathway 102 7 4CL (32) View species results
Steroid pathway 66 12 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1280 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 249 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PMT
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Gene Pathway Family Confidence Status
solanum_pimpinellifolium_SPIMP01g0024370 Alkaloid PMT medium pass
solanum_pimpinellifolium_SPIMP03g0086790 Alkaloid PMT medium borderline
solanum_pimpinellifolium_SPIMP03g0105290 Alkaloid PMT low borderline
solanum_pimpinellifolium_SPIMP03g0114000 Alkaloid PMT low borderline
solanum_pimpinellifolium_SPIMP04g0129760 Alkaloid PMT medium borderline
solanum_pimpinellifolium_SPIMP05g0151360 Alkaloid PMT medium borderline
solanum_pimpinellifolium_SPIMP05g0160780 Alkaloid PMT low borderline
solanum_pimpinellifolium_SPIMP05g0174820 Alkaloid PMT low borderline
solanum_pimpinellifolium_SPIMP06g0187120 Alkaloid PMT low borderline
solanum_pimpinellifolium_SPIMP06g0188550 Alkaloid PMT medium borderline
solanum_pimpinellifolium_SPIMP06g0188560 Alkaloid PMT medium borderline
solanum_pimpinellifolium_SPIMP07g0211650 Alkaloid PMT low borderline
solanum_pimpinellifolium_SPIMP07g0219310 Alkaloid PMT medium pass
solanum_pimpinellifolium_SPIMP07g0223660 Alkaloid PMT medium pass
solanum_pimpinellifolium_SPIMP07g0223690 Alkaloid PMT medium pass
solanum_pimpinellifolium_SPIMP07g0223700 Alkaloid PMT medium pass
solanum_pimpinellifolium_SPIMP08g0238010 Alkaloid PMT medium borderline
solanum_pimpinellifolium_SPIMP08g0244970 Alkaloid PMT medium pass
solanum_pimpinellifolium_SPIMP08g0253930 Alkaloid PMT low borderline
solanum_pimpinellifolium_SPIMP09g0280810 Alkaloid PMT medium pass
solanum_pimpinellifolium_SPIMP11g0323970 Alkaloid PMT low borderline
solanum_pimpinellifolium_SPIMP12g0362510 Alkaloid PMT low borderline
solanum_pimpinellifolium_SPIMP12g0362530 Alkaloid PMT low borderline