PlantSME Plant secondary metabolism enzyme database

Solanum pimpinellifolium (solanum_pimpinellifolium)

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Imported from atlas release summary for Solanum pimpinellifolium.

1183
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 336 19 BAHD (132) View species results
Phenylpropanoid pathway 285 12 POD (112) View species results
Alkaloid pathway 259 23 NMT (38) View species results
Flavonoid pathway 135 12 UFGT (50) View species results
Rosmarinic acid pathway 102 7 4CL (32) View species results
Steroid pathway 66 12 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1280 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 249 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GES
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Gene Pathway Family Confidence Status
solanum_pimpinellifolium_SPIMP01g0011840 Alkaloid GES medium pass
solanum_pimpinellifolium_SPIMP01g0039790 Alkaloid GES medium pass
solanum_pimpinellifolium_SPIMP01g0039800 Alkaloid GES low borderline
solanum_pimpinellifolium_SPIMP01g0039810 Alkaloid GES medium pass
solanum_pimpinellifolium_SPIMP01g0044000 Alkaloid GES medium pass
solanum_pimpinellifolium_SPIMP01g0044010 Alkaloid GES medium pass
solanum_pimpinellifolium_SPIMP01g0044020 Alkaloid GES low borderline
solanum_pimpinellifolium_SPIMP02g0069780 Alkaloid GES medium pass
solanum_pimpinellifolium_SPIMP02g0069820 Alkaloid GES low borderline
solanum_pimpinellifolium_SPIMP03g0086110 Alkaloid GES medium pass
solanum_pimpinellifolium_SPIMP03g0087310 Alkaloid GES medium pass
solanum_pimpinellifolium_SPIMP04g0136260 Alkaloid GES medium pass
solanum_pimpinellifolium_SPIMP04g0137130 Alkaloid GES medium pass
solanum_pimpinellifolium_SPIMP05g0166300 Alkaloid GES medium pass
solanum_pimpinellifolium_SPIMP05g0166310 Alkaloid GES medium pass
solanum_pimpinellifolium_SPIMP06g0189980 Alkaloid GES low borderline
solanum_pimpinellifolium_SPIMP06g0190050 Alkaloid GES medium pass
solanum_pimpinellifolium_SPIMP06g0190250 Alkaloid GES medium pass
solanum_pimpinellifolium_SPIMP06g0205560 Alkaloid GES low borderline
solanum_pimpinellifolium_SPIMP07g0210100 Alkaloid GES medium pass
solanum_pimpinellifolium_SPIMP07g0224040 Alkaloid GES medium pass
solanum_pimpinellifolium_SPIMP07g0224050 Alkaloid GES medium pass
solanum_pimpinellifolium_SPIMP07g0224060 Alkaloid GES medium pass
solanum_pimpinellifolium_SPIMP07g0233450 Alkaloid GES medium pass
solanum_pimpinellifolium_SPIMP08g0234130 Alkaloid GES low borderline
solanum_pimpinellifolium_SPIMP08g0234160 Alkaloid GES medium pass
solanum_pimpinellifolium_SPIMP08g0234190 Alkaloid GES low borderline
solanum_pimpinellifolium_SPIMP08g0234210 Alkaloid GES low borderline
solanum_pimpinellifolium_SPIMP08g0241310 Alkaloid GES low borderline
solanum_pimpinellifolium_SPIMP08g0249600 Alkaloid GES low borderline
solanum_pimpinellifolium_SPIMP09g0261300 Alkaloid GES low borderline
solanum_pimpinellifolium_SPIMP09g0285660 Alkaloid GES medium pass
solanum_pimpinellifolium_SPIMP10g0287200 Alkaloid GES medium pass
solanum_pimpinellifolium_SPIMP10g0287210 Alkaloid GES low borderline
solanum_pimpinellifolium_SPIMP12g0339920 Alkaloid GES medium pass
solanum_pimpinellifolium_SPIMP12g0346890 Alkaloid GES medium pass