PlantSME Plant secondary metabolism enzyme database

Solanum pimpinellifolium (solanum_pimpinellifolium)

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Imported from atlas release summary for Solanum pimpinellifolium.

1183
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 336 19 BAHD (132) View species results
Phenylpropanoid pathway 285 12 POD (112) View species results
Alkaloid pathway 259 23 NMT (38) View species results
Flavonoid pathway 135 12 UFGT (50) View species results
Rosmarinic acid pathway 102 7 4CL (32) View species results
Steroid pathway 66 12 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1280 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 249 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CCR
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Gene Pathway Family Confidence Status
solanum_pimpinellifolium_SPIMP01g0024310 Phenylpropanoid CCR medium borderline
solanum_pimpinellifolium_SPIMP01g0033290 Phenylpropanoid CCR medium pass
solanum_pimpinellifolium_SPIMP01g0040310 Phenylpropanoid CCR medium borderline
solanum_pimpinellifolium_SPIMP02g0055440 Phenylpropanoid CCR low borderline
solanum_pimpinellifolium_SPIMP02g0074650 Phenylpropanoid CCR medium borderline
solanum_pimpinellifolium_SPIMP02g0076610 Phenylpropanoid CCR medium pass
solanum_pimpinellifolium_SPIMP02g0079790 Phenylpropanoid CCR medium pass
solanum_pimpinellifolium_SPIMP03g0113240 Phenylpropanoid CCR medium borderline
solanum_pimpinellifolium_SPIMP04g0126470 Phenylpropanoid CCR low borderline
solanum_pimpinellifolium_SPIMP04g0140070 Phenylpropanoid CCR low borderline
solanum_pimpinellifolium_SPIMP04g0150450 Phenylpropanoid CCR medium borderline
solanum_pimpinellifolium_SPIMP05g0171400 Phenylpropanoid CCR medium borderline
solanum_pimpinellifolium_SPIMP05g0174530 Phenylpropanoid CCR low borderline
solanum_pimpinellifolium_SPIMP06g0191380 Phenylpropanoid CCR medium pass
solanum_pimpinellifolium_SPIMP06g0195310 Phenylpropanoid CCR medium borderline
solanum_pimpinellifolium_SPIMP08g0233610 Phenylpropanoid CCR medium pass
solanum_pimpinellifolium_SPIMP08g0252550 Phenylpropanoid CCR low borderline
solanum_pimpinellifolium_SPIMP10g0291340 Phenylpropanoid CCR low borderline
solanum_pimpinellifolium_SPIMP10g0292480 Phenylpropanoid CCR low borderline
solanum_pimpinellifolium_SPIMP11g0337410 Phenylpropanoid CCR medium borderline
solanum_pimpinellifolium_SPIMP12g0347920 Phenylpropanoid CCR low borderline
solanum_pimpinellifolium_SPIMP12g0360620 Phenylpropanoid CCR low borderline