PlantSME Plant secondary metabolism enzyme database

Solanum pimpinellifolium (solanum_pimpinellifolium)

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Imported from atlas release summary for Solanum pimpinellifolium.

1736
Candidate Protein Records
1183
Pathway-Level Records
3474
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 336 19 BAHD (132) View species results
Phenylpropanoid pathway 285 12 POD (112) View species results
Alkaloid pathway 259 23 NMT (38) View species results
Flavonoid pathway 135 12 UFGT (50) View species results
Rosmarinic acid pathway 102 7 4CL (32) View species results
Steroid pathway 66 12 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1280 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 249 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Protein/Isoform Record Pathway Family Confidence Status
solanum_pimpinellifolium_SPIMP10g0306850 Rosmarinic Acid C4H low borderline
solanum_pimpinellifolium_SPIMP10g0306860 Rosmarinic Acid C4H low borderline
solanum_pimpinellifolium_SPIMP10g0306870 Rosmarinic Acid C4H low borderline
solanum_pimpinellifolium_SPIMP10g0306910 Rosmarinic Acid C4H low borderline
solanum_pimpinellifolium_SPIMP10g0309310 Rosmarinic Acid C4H low borderline
solanum_pimpinellifolium_SPIMP10g0309320 Rosmarinic Acid C4H low borderline
solanum_pimpinellifolium_SPIMP10g0310750 Rosmarinic Acid C4H low borderline
solanum_pimpinellifolium_SPIMP10g0311030 Rosmarinic Acid C4H low borderline
solanum_pimpinellifolium_SPIMP10g0311040 Rosmarinic Acid C4H low borderline
solanum_pimpinellifolium_SPIMP10g0311840 Rosmarinic Acid C4H low borderline
solanum_pimpinellifolium_SPIMP10g0312750 Rosmarinic Acid C4H low borderline
solanum_pimpinellifolium_SPIMP11g0315510 Rosmarinic Acid C4H low borderline
solanum_pimpinellifolium_SPIMP11g0316300 Rosmarinic Acid C4H low borderline
solanum_pimpinellifolium_SPIMP11g0316780 Rosmarinic Acid C4H low borderline
solanum_pimpinellifolium_SPIMP11g0326650 Rosmarinic Acid C4H low borderline
solanum_pimpinellifolium_SPIMP11g0328010 Rosmarinic Acid C4H low borderline
solanum_pimpinellifolium_SPIMP11g0330730 Rosmarinic Acid C4H low borderline
solanum_pimpinellifolium_SPIMP11g0333130 Rosmarinic Acid C4H low borderline
solanum_pimpinellifolium_SPIMP12g0338450 Rosmarinic Acid C4H low borderline
solanum_pimpinellifolium_SPIMP12g0339800 Rosmarinic Acid C4H low borderline
solanum_pimpinellifolium_SPIMP12g0340180 Rosmarinic Acid C4H low borderline
solanum_pimpinellifolium_SPIMP12g0347270 Rosmarinic Acid C4H low borderline
solanum_pimpinellifolium_SPIMP12g0347310 Rosmarinic Acid C4H low borderline
solanum_pimpinellifolium_SPIMP12g0352840 Rosmarinic Acid C4H low borderline
solanum_pimpinellifolium_SPIMP12g0355560 Rosmarinic Acid C4H low borderline
solanum_pimpinellifolium_SPIMP12g0357260 Rosmarinic Acid C4H low borderline
solanum_pimpinellifolium_SPIMP12g0357280 Rosmarinic Acid C4H low borderline
solanum_pimpinellifolium_SPIMP12g0359250 Rosmarinic Acid C4H low borderline
solanum_pimpinellifolium_SPIMP12g0360290 Rosmarinic Acid C4H low borderline
solanum_pimpinellifolium_SPIMP12g0360340 Rosmarinic Acid C4H low borderline
solanum_pimpinellifolium_SPIMP12g0360350 Rosmarinic Acid C4H medium pass
solanum_pimpinellifolium_SPIMP12g0360700 Rosmarinic Acid C4H medium pass