PlantSME Plant secondary metabolism enzyme database

Solanum pimpinellifolium (solanum_pimpinellifolium)

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Imported from atlas release summary for Solanum pimpinellifolium.

1183
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 336 19 BAHD (132) View species results
Phenylpropanoid pathway 285 12 POD (112) View species results
Alkaloid pathway 259 23 NMT (38) View species results
Flavonoid pathway 135 12 UFGT (50) View species results
Rosmarinic acid pathway 102 7 4CL (32) View species results
Steroid pathway 66 12 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1280 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 249 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
solanum_pimpinellifolium_SPIMP04g0126950 Alkaloid 7DLGT low borderline
solanum_pimpinellifolium_SPIMP04g0126970 Alkaloid 7DLGT high pass
solanum_pimpinellifolium_SPIMP04g0143130 Alkaloid 7DLGT medium pass
solanum_pimpinellifolium_SPIMP04g0143140 Alkaloid 7DLGT low borderline
solanum_pimpinellifolium_SPIMP04g0143170 Alkaloid 7DLGT low borderline
solanum_pimpinellifolium_SPIMP04g0146880 Alkaloid 7DLGT low borderline
solanum_pimpinellifolium_SPIMP04g0147660 Alkaloid 7DLGT low borderline
solanum_pimpinellifolium_SPIMP04g0150520 Alkaloid 7DLGT low borderline
solanum_pimpinellifolium_SPIMP05g0151760 Alkaloid 7DLGT low borderline
solanum_pimpinellifolium_SPIMP05g0156580 Alkaloid 7DLGT low borderline
solanum_pimpinellifolium_SPIMP05g0160860 Alkaloid 7DLGT low borderline
solanum_pimpinellifolium_SPIMP05g0163390 Alkaloid 7DLGT low borderline
solanum_pimpinellifolium_SPIMP05g0171840 Alkaloid 7DLGT low borderline
solanum_pimpinellifolium_SPIMP05g0173540 Alkaloid 7DLGT high pass
solanum_pimpinellifolium_SPIMP05g0174560 Alkaloid 7DLGT medium pass
solanum_pimpinellifolium_SPIMP05g0174650 Alkaloid 7DLGT low borderline
solanum_pimpinellifolium_SPIMP05g0176510 Alkaloid 7DLGT low borderline
solanum_pimpinellifolium_SPIMP06g0181900 Alkaloid 7DLGT high pass
solanum_pimpinellifolium_SPIMP06g0181920 Alkaloid 7DLGT medium pass
solanum_pimpinellifolium_SPIMP06g0199490 Alkaloid 7DLGT low borderline
solanum_pimpinellifolium_SPIMP06g0203060 Alkaloid 7DLGT low borderline
solanum_pimpinellifolium_SPIMP06g0203730 Alkaloid 7DLGT low borderline
solanum_pimpinellifolium_SPIMP07g0207860 Alkaloid 7DLGT low borderline
solanum_pimpinellifolium_SPIMP07g0209540 Alkaloid 7DLGT low borderline
solanum_pimpinellifolium_SPIMP07g0219620 Alkaloid 7DLGT low borderline
solanum_pimpinellifolium_SPIMP07g0219630 Alkaloid 7DLGT low borderline
solanum_pimpinellifolium_SPIMP07g0220990 Alkaloid 7DLGT low borderline
solanum_pimpinellifolium_SPIMP07g0221000 Alkaloid 7DLGT low borderline
solanum_pimpinellifolium_SPIMP07g0221010 Alkaloid 7DLGT low borderline
solanum_pimpinellifolium_SPIMP07g0221040 Alkaloid 7DLGT low borderline
solanum_pimpinellifolium_SPIMP07g0221060 Alkaloid 7DLGT low borderline
solanum_pimpinellifolium_SPIMP07g0221100 Alkaloid 7DLGT low borderline
solanum_pimpinellifolium_SPIMP07g0221110 Alkaloid 7DLGT low borderline
solanum_pimpinellifolium_SPIMP07g0221120 Alkaloid 7DLGT low borderline
solanum_pimpinellifolium_SPIMP07g0221300 Alkaloid 7DLGT low borderline
solanum_pimpinellifolium_SPIMP07g0221380 Alkaloid 7DLGT low borderline
solanum_pimpinellifolium_SPIMP08g0234720 Alkaloid 7DLGT medium pass
solanum_pimpinellifolium_SPIMP08g0234730 Alkaloid 7DLGT medium pass
solanum_pimpinellifolium_SPIMP08g0237130 Alkaloid 7DLGT low borderline
solanum_pimpinellifolium_SPIMP08g0237770 Alkaloid 7DLGT low borderline
solanum_pimpinellifolium_SPIMP08g0245160 Alkaloid 7DLGT medium pass
solanum_pimpinellifolium_SPIMP08g0252870 Alkaloid 7DLGT medium pass
solanum_pimpinellifolium_SPIMP09g0260780 Alkaloid 7DLGT low borderline
solanum_pimpinellifolium_SPIMP09g0260820 Alkaloid 7DLGT low borderline
solanum_pimpinellifolium_SPIMP09g0261310 Alkaloid 7DLGT low borderline
solanum_pimpinellifolium_SPIMP09g0273280 Alkaloid 7DLGT low borderline
solanum_pimpinellifolium_SPIMP09g0282600 Alkaloid 7DLGT low borderline
solanum_pimpinellifolium_SPIMP09g0285670 Alkaloid 7DLGT low borderline
solanum_pimpinellifolium_SPIMP09g0286210 Alkaloid 7DLGT low borderline
solanum_pimpinellifolium_SPIMP10g0290580 Alkaloid 7DLGT low borderline