Trocholejeunea sandvicensis (trocholejeunea_sandvicensis)
Imported from atlas release summary for Trocholejeunea sandvicensis.
863
Candidate Protein Records
526
Pathway-Level Records
1651
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
1651
Family-Level Calls
C4H
6.66%
BAHD
6.24%
C3'H/CYP98A
6.18%
CYP76
6.0%
POD
4.72%
T3O
4.06%
IFS
4.06%
4CL
4.0%
Other Families
58.09%
More Families (94)
NMT
53
3.21%
GS
51
3.09%
STR
48
2.91%
BR6OX2/CYP85A2
47
2.85%
IFR
40
2.42%
F3'H/CYP75B
37
2.24%
DWF4/CYP90B1
32
1.94%
CAD
30
1.82%
F3H
28
1.7%
RAS
23
1.39%
UGT
22
1.33%
LAMT
21
1.27%
TRI/TRII
21
1.27%
PAL
21
1.27%
G8O/G8H
20
1.21%
HCT
20
1.21%
SMT1/SMT2/SMT3
20
1.21%
8HGO
18
1.09%
T16H
17
1.03%
CODM/T6ODM
17
1.03%
COMT
17
1.03%
7DLGT
16
0.97%
IO
14
0.85%
F3'5'H/CYP75A
12
0.73%
FNS
12
0.73%
UFGT
12
0.73%
CYP90D1
12
0.73%
CPD/CYP90A1
12
0.73%
H6H
11
0.67%
ANR
11
0.67%
F5H/CYP84A
11
0.67%
PYKS
10
0.61%
LAC
10
0.61%
CAS
10
0.61%
SGD
9
0.55%
COR
7
0.42%
CSE
7
0.42%
TAT
7
0.42%
BR6OX1/CYP85A1
7
0.42%
TPS
7
0.42%
CYP71
7
0.42%
DXS
7
0.42%
CHS
6
0.36%
CCR
6
0.36%
GGPPS
6
0.36%
CNMT
5
0.3%
SLS
5
0.3%
HPPR
5
0.3%
DET2
5
0.3%
AACT
5
0.3%
GES
4
0.24%
BBE
4
0.24%
PMT
4
0.24%
ISY
4
0.24%
CPR
4
0.24%
SQS/FDFT1
4
0.24%
MVK
4
0.24%
FPPS
4
0.24%
16OMT
3
0.18%
MPO
3
0.18%
ADC
3
0.18%
XMT_MXMT_DXMT
3
0.18%
CYP80B1
3
0.18%
DFR
3
0.18%
CCoAOMT
3
0.18%
DWF1
3
0.18%
DWF5
3
0.18%
SMO1/SMO2
3
0.18%
HYD1
3
0.18%
MVD
3
0.18%
MCT/IspD
3
0.18%
NCS
2
0.12%
7DLH
2
0.12%
6OMT_4OMT_SOMT
2
0.12%
SQE
2
0.12%
CPI1
2
0.12%
HDR/IspH
2
0.12%
IDI
2
0.12%
PMK
2
0.12%
CYP719
1
0.06%
TDC
1
0.06%
TYDC_DDC
1
0.06%
ANS/LDOX
1
0.06%
CHI
1
0.06%
ROT3/CYP90C1
1
0.06%
CYP51G1
1
0.06%
DWF7
1
0.06%
FK
1
0.06%
HDS/IspG
1
0.06%
HMGR
1
0.06%
DXR
1
0.06%
CMK/IspE
1
0.06%
MDS/IspF
1
0.06%
HMGS
1
0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 144 | 10 | POD (73) | View species results |
| Terpenoid pathway | 118 | 19 | BAHD (52) | View species results |
| Alkaloid pathway | 115 | 18 | NMT (19) | View species results |
| Rosmarinic acid pathway | 59 | 7 | C4H (31) | View species results |
| Flavonoid pathway | 52 | 9 | IFR (17) | View species results |
| Steroid pathway | 38 | 12 | SMT1/SMT2/SMT3 (11) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 686 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 146 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| TRsanscaffold_40123620 | Phenylpropanoid | C3'H/CYP98A | low | borderline |
| TRsanscaffold_40132850 | Phenylpropanoid | C3'H/CYP98A | low | borderline |
| TRsanscaffold_40136570 | Phenylpropanoid | C3'H/CYP98A | medium | borderline |
| TRsanscaffold_40139540 | Phenylpropanoid | C3'H/CYP98A | low | borderline |
| TRsanscaffold_40142500 | Phenylpropanoid | C3'H/CYP98A | low | borderline |
| TRsanscaffold_40144140 | Phenylpropanoid | C3'H/CYP98A | medium | borderline |
| TRsanscaffold_40145690 | Phenylpropanoid | C3'H/CYP98A | low | borderline |
| TRsanscaffold_50147240 | Phenylpropanoid | C3'H/CYP98A | medium | borderline |
| TRsanscaffold_50154930 | Phenylpropanoid | C3'H/CYP98A | low | borderline |
| TRsanscaffold_50159500 | Phenylpropanoid | C3'H/CYP98A | medium | pass |
| TRsanscaffold_50159590 | Phenylpropanoid | C3'H/CYP98A | low | borderline |
| TRsanscaffold_50159700 | Phenylpropanoid | C3'H/CYP98A | medium | borderline |
| TRsanscaffold_50160560 | Phenylpropanoid | C3'H/CYP98A | high | pass |
| TRsanscaffold_60166130 | Phenylpropanoid | C3'H/CYP98A | medium | borderline |
| TRsanscaffold_60169620 | Phenylpropanoid | C3'H/CYP98A | low | borderline |
| TRsanscaffold_60171040 | Phenylpropanoid | C3'H/CYP98A | low | borderline |
| TRsanscaffold_60173450 | Phenylpropanoid | C3'H/CYP98A | low | borderline |
| TRsanscaffold_60178510 | Phenylpropanoid | C3'H/CYP98A | low | borderline |
| TRsanscaffold_60178580 | Phenylpropanoid | C3'H/CYP98A | low | borderline |
| TRsanscaffold_60181040 | Phenylpropanoid | C3'H/CYP98A | medium | borderline |
| TRsanscaffold_60181080 | Phenylpropanoid | C3'H/CYP98A | medium | borderline |
| TRsanscaffold_60181100 | Phenylpropanoid | C3'H/CYP98A | medium | borderline |
| TRsanscaffold_60181110 | Phenylpropanoid | C3'H/CYP98A | medium | borderline |
| TRsanscaffold_60182070 | Phenylpropanoid | C3'H/CYP98A | low | borderline |
| TRsanscaffold_60183390 | Phenylpropanoid | C3'H/CYP98A | medium | borderline |
| TRsanscaffold_60184280 | Phenylpropanoid | C3'H/CYP98A | medium | borderline |
| TRsanscaffold_60185180 | Phenylpropanoid | C3'H/CYP98A | medium | borderline |
| TRsanscaffold_70197550 | Phenylpropanoid | C3'H/CYP98A | medium | borderline |
| TRsanscaffold_80203270 | Phenylpropanoid | C3'H/CYP98A | medium | borderline |
| TRsanscaffold_80206890 | Phenylpropanoid | C3'H/CYP98A | medium | borderline |
| TRsanscaffold_80208440 | Phenylpropanoid | C3'H/CYP98A | medium | borderline |
| TRsanscaffold_80208880 | Phenylpropanoid | C3'H/CYP98A | low | borderline |
| TRsanscaffold_90215480 | Phenylpropanoid | C3'H/CYP98A | medium | borderline |
| TRsanscaffold_90216840 | Phenylpropanoid | C3'H/CYP98A | medium | borderline |
| TRsanscaffold_90216860 | Phenylpropanoid | C3'H/CYP98A | medium | borderline |
| TRsanscaffold_120050500 | Phenylpropanoid | C4H/CYP73A | low | borderline |
| TRsanscaffold_20083470 | Phenylpropanoid | C4H/CYP73A | medium | borderline |
| TRsanscaffold_30110890 | Phenylpropanoid | C4H/CYP73A | medium | borderline |
| TRsanscaffold_50153870 | Phenylpropanoid | C4H/CYP73A | low | borderline |
| TRsanscaffold_100018220 | Phenylpropanoid | CAD | low | borderline |
| TRsanscaffold_100019280 | Phenylpropanoid | CAD | low | borderline |
| TRsanscaffold_100024200 | Phenylpropanoid | CAD | medium | pass |
| TRsanscaffold_10002560 | Phenylpropanoid | CAD | medium | pass |
| TRsanscaffold_100034450 | Phenylpropanoid | CAD | medium | borderline |
| TRsanscaffold_10010220 | Phenylpropanoid | CAD | medium | pass |
| TRsanscaffold_10011910 | Phenylpropanoid | CAD | low | borderline |
| TRsanscaffold_110045330 | Phenylpropanoid | CAD | low | borderline |
| TRsanscaffold_20069290 | Phenylpropanoid | CAD | medium | borderline |
| TRsanscaffold_20076870 | Phenylpropanoid | CAD | low | borderline |
| TRsanscaffold_20094390 | Phenylpropanoid | CAD | low | borderline |