PlantSME Plant secondary metabolism enzyme database

Trocholejeunea sandvicensis (trocholejeunea_sandvicensis)

Imported from atlas release summary for Trocholejeunea sandvicensis.

526
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 144 10 POD (73) View species results
Terpenoid pathway 118 19 BAHD (52) View species results
Alkaloid pathway 115 18 NMT (19) View species results
Rosmarinic acid pathway 59 7 C4H (31) View species results
Flavonoid pathway 52 9 IFR (17) View species results
Steroid pathway 38 12 SMT1/SMT2/SMT3 (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 686 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 146 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: G8O/G8H
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Gene Pathway Family Confidence Status
TRsanscaffold_10005970 Alkaloid G8O/G8H low borderline
TRsanscaffold_10009320 Alkaloid G8O/G8H medium borderline
TRsanscaffold_110042600 Alkaloid G8O/G8H medium pass
TRsanscaffold_120050500 Alkaloid G8O/G8H medium borderline
TRsanscaffold_20064030 Alkaloid G8O/G8H medium borderline
TRsanscaffold_20065880 Alkaloid G8O/G8H medium borderline
TRsanscaffold_30106970 Alkaloid G8O/G8H medium borderline
TRsanscaffold_30106980 Alkaloid G8O/G8H medium borderline
TRsanscaffold_30110890 Alkaloid G8O/G8H medium borderline
TRsanscaffold_40121350 Alkaloid G8O/G8H medium borderline
TRsanscaffold_40144150 Alkaloid G8O/G8H medium borderline
TRsanscaffold_50159590 Alkaloid G8O/G8H low borderline
TRsanscaffold_60164920 Alkaloid G8O/G8H medium pass
TRsanscaffold_60178510 Alkaloid G8O/G8H medium borderline
TRsanscaffold_60179850 Alkaloid G8O/G8H medium borderline
TRsanscaffold_60181020 Alkaloid G8O/G8H medium borderline
TRsanscaffold_60181130 Alkaloid G8O/G8H low borderline
TRsanscaffold_60186170 Alkaloid G8O/G8H medium borderline
TRsanscaffold_70187540 Alkaloid G8O/G8H medium borderline
TRsanscaffold_80208440 Alkaloid G8O/G8H low borderline