PlantSME Plant secondary metabolism enzyme database

Trocholejeunea sandvicensis (trocholejeunea_sandvicensis)

Imported from atlas release summary for Trocholejeunea sandvicensis.

526
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 144 10 POD (73) View species results
Terpenoid pathway 118 19 BAHD (52) View species results
Alkaloid pathway 115 18 NMT (19) View species results
Rosmarinic acid pathway 59 7 C4H (31) View species results
Flavonoid pathway 52 9 IFR (17) View species results
Steroid pathway 38 12 SMT1/SMT2/SMT3 (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 686 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 146 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
Reset
Gene Pathway Family Confidence Status
TRsanscaffold_30107370 Terpenoid AACT medium borderline
TRsanscaffold_40138680 Terpenoid AACT low borderline
TRsanscaffold_50152560 Terpenoid AACT low borderline
TRsanscaffold_70194480 Terpenoid AACT medium borderline
TRsanscaffold_80203250 Terpenoid AACT medium borderline
TRsanscaffold_100017970 Terpenoid BAHD medium pass
TRsanscaffold_100018390 Terpenoid BAHD low borderline
TRsanscaffold_100018830 Terpenoid BAHD low borderline
TRsanscaffold_100018960 Terpenoid BAHD medium pass
TRsanscaffold_100019680 Terpenoid BAHD low borderline
TRsanscaffold_100019990 Terpenoid BAHD low borderline
TRsanscaffold_100020060 Terpenoid BAHD low borderline
TRsanscaffold_100021130 Terpenoid BAHD medium pass
TRsanscaffold_100024400 Terpenoid BAHD low borderline
TRsanscaffold_100024540 Terpenoid BAHD medium pass
TRsanscaffold_100032400 Terpenoid BAHD medium pass
TRsanscaffold_100033680 Terpenoid BAHD medium pass
TRsanscaffold_100034460 Terpenoid BAHD medium pass
TRsanscaffold_100035720 Terpenoid BAHD low borderline
TRsanscaffold_100036010 Terpenoid BAHD medium pass
TRsanscaffold_100039320 Terpenoid BAHD low borderline
TRsanscaffold_110043450 Terpenoid BAHD low borderline
TRsanscaffold_110045520 Terpenoid BAHD medium pass
TRsanscaffold_120050930 Terpenoid BAHD low borderline
TRsanscaffold_120051100 Terpenoid BAHD low borderline
TRsanscaffold_120051530 Terpenoid BAHD medium pass
TRsanscaffold_150057510 Terpenoid BAHD medium pass
TRsanscaffold_20064680 Terpenoid BAHD low borderline
TRsanscaffold_20064690 Terpenoid BAHD medium pass
TRsanscaffold_20070570 Terpenoid BAHD low borderline
TRsanscaffold_20071980 Terpenoid BAHD medium pass
TRsanscaffold_20074030 Terpenoid BAHD medium pass
TRsanscaffold_20074830 Terpenoid BAHD medium pass
TRsanscaffold_20076780 Terpenoid BAHD medium pass
TRsanscaffold_20077090 Terpenoid BAHD low borderline
TRsanscaffold_20078650 Terpenoid BAHD medium pass
TRsanscaffold_20079170 Terpenoid BAHD medium pass
TRsanscaffold_20079630 Terpenoid BAHD medium pass
TRsanscaffold_20080940 Terpenoid BAHD low borderline
TRsanscaffold_20081990 Terpenoid BAHD medium pass
TRsanscaffold_20085230 Terpenoid BAHD low borderline
TRsanscaffold_20085260 Terpenoid BAHD low borderline
TRsanscaffold_20085270 Terpenoid BAHD low borderline
TRsanscaffold_20087220 Terpenoid BAHD low borderline
TRsanscaffold_20087310 Terpenoid BAHD medium pass
TRsanscaffold_20087780 Terpenoid BAHD low borderline
TRsanscaffold_20088160 Terpenoid BAHD medium pass
TRsanscaffold_20089580 Terpenoid BAHD medium pass
TRsanscaffold_20091000 Terpenoid BAHD medium pass
TRsanscaffold_20092090 Terpenoid BAHD medium pass