Trocholejeunea sandvicensis (trocholejeunea_sandvicensis)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Phenylpropanoid pathway 27.38% Terpenoid pathway 22.43% Alkaloid pathway 21.86% Rosmarinic acid pathway 11.22% Flavonoid pathway 9.89% Steroid pathway 7.22%

Family Distribution

526 Candidate Genes

C4H 6.66% BAHD 6.24% C3'H/CYP98A 6.18% CYP76 6.0% POD 4.72% T3O 4.06% IFS 4.06% 4CL 4.0%

Other Families 58.09%

More Families (94)

NMT 53 3.21% GS 51 3.09% STR 48 2.91% BR6OX2/CYP85A2 47 2.85% IFR 40 2.42% F3'H/CYP75B 37 2.24% DWF4/CYP90B1 32 1.94% CAD 30 1.82% F3H 28 1.7% RAS 23 1.39% UGT 22 1.33% LAMT 21 1.27% TRI/TRII 21 1.27% PAL 21 1.27% G8O/G8H 20 1.21% HCT 20 1.21% SMT1/SMT2/SMT3 20 1.21% 8HGO 18 1.09% T16H 17 1.03% CODM/T6ODM 17 1.03% COMT 17 1.03% 7DLGT 16 0.97% IO 14 0.85% F3'5'H/CYP75A 12 0.73% FNS 12 0.73% UFGT 12 0.73% CYP90D1 12 0.73% CPD/CYP90A1 12 0.73% H6H 11 0.67% ANR 11 0.67% F5H/CYP84A 11 0.67% PYKS 10 0.61% LAC 10 0.61% CAS 10 0.61% SGD 9 0.55% COR 7 0.42% CSE 7 0.42% TAT 7 0.42% BR6OX1/CYP85A1 7 0.42% TPS 7 0.42% CYP71 7 0.42% DXS 7 0.42% CHS 6 0.36% CCR 6 0.36% GGPPS 6 0.36% CNMT 5 0.3% SLS 5 0.3% HPPR 5 0.3% DET2 5 0.3% AACT 5 0.3% GES 4 0.24% BBE 4 0.24% PMT 4 0.24% ISY 4 0.24% CPR 4 0.24% SQS/FDFT1 4 0.24% MVK 4 0.24% FPPS 4 0.24% 16OMT 3 0.18% MPO 3 0.18% ADC 3 0.18% XMT_MXMT_DXMT 3 0.18% CYP80B1 3 0.18% DFR 3 0.18% CCoAOMT 3 0.18% DWF1 3 0.18% DWF5 3 0.18% SMO1/SMO2 3 0.18% HYD1 3 0.18% MVD 3 0.18% MCT/IspD 3 0.18% NCS 2 0.12% 7DLH 2 0.12% 6OMT_4OMT_SOMT 2 0.12% SQE 2 0.12% CPI1 2 0.12% HDR/IspH 2 0.12% IDI 2 0.12% PMK 2 0.12% CYP719 1 0.06% TDC 1 0.06% TYDC_DDC 1 0.06% ANS/LDOX 1 0.06% CHI 1 0.06% ROT3/CYP90C1 1 0.06% CYP51G1 1 0.06% DWF7 1 0.06% FK 1 0.06% HDS/IspG 1 0.06% HMGR 1 0.06% DXR 1 0.06% CMK/IspE 1 0.06% MDS/IspF 1 0.06% HMGS 1 0.06%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Phenylpropanoid pathway	144	10	POD (73)	View species results
Terpenoid pathway	118	19	BAHD (52)	View species results
Alkaloid pathway	115	18	NMT (19)	View species results
Rosmarinic acid pathway	59	7	C4H (31)	View species results
Flavonoid pathway	52	9	IFR (17)	View species results
Steroid pathway	38	12	SMT1/SMT2/SMT3 (11)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	23	686	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	146	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: NMT

Gene	Pathway	Family	Confidence	Status	Best Target
TRsanscaffold_10001170	Alkaloid	NMT	low	borderline	NMT__00056__sp_Q9FNE9_ATXR6_ARATH
TRsanscaffold_100022830	Alkaloid	NMT	medium	pass	NMT__00011__sp_A9X7L0_ANMT_RUTGR
TRsanscaffold_100022890	Alkaloid	NMT	medium	pass	NMT__00016__sp_F4JNX3_CMKMT_ARATH
TRsanscaffold_100023590	Alkaloid	NMT	medium	pass	NMT__00066__sp_Q9SU94_ANM11_ARATH
TRsanscaffold_100023990	Alkaloid	NMT	medium	pass	NMT__00041__sp_Q8GWT4_ANM15_ARATH
TRsanscaffold_100028580	Alkaloid	NMT	medium	borderline	NMT__00011__sp_A9X7L0_ANMT_RUTGR
TRsanscaffold_100029200	Alkaloid	NMT	medium	pass	NMT__00018__sp_I1M2U5_NAMT1_SOYBN
TRsanscaffold_100032690	Alkaloid	NMT	medium	pass	NMT__00060__sp_Q9MAT5_ANM10_ARATH
TRsanscaffold_100038150	Alkaloid	NMT	medium	pass	NMT__00025__sp_P93831_CLF_ARATH
TRsanscaffold_110042420	Alkaloid	NMT	medium	borderline	NMT__00011__sp_A9X7L0_ANMT_RUTGR
TRsanscaffold_110045250	Alkaloid	NMT	low	borderline	NMT__00042__sp_Q8GZB6_SUVH4_ARATH
TRsanscaffold_110046040	Alkaloid	NMT	medium	pass	NMT__00046__sp_Q8VZ17_SUVH6_ARATH
TRsanscaffold_110046360	Alkaloid	NMT	medium	borderline	NMT__00050__sp_Q944H0_PEAM2_ARATH
TRsanscaffold_110049650	Alkaloid	NMT	low	borderline	NMT__00028__sp_Q2LAE1_ASHH2_ARATH
TRsanscaffold_120054130	Alkaloid	NMT	medium	borderline	NMT__00050__sp_Q944H0_PEAM2_ARATH
TRsanscaffold_150057850	Alkaloid	NMT	medium	pass	NMT__00048__sp_Q8W595_SUVR4_ARATH
TRsanscaffold_20070770	Alkaloid	NMT	medium	borderline	NMT__00011__sp_A9X7L0_ANMT_RUTGR
TRsanscaffold_20074070	Alkaloid	NMT	medium	pass	NMT__00016__sp_F4JNX3_CMKMT_ARATH
TRsanscaffold_20075050	Alkaloid	NMT	low	borderline	NMT__00054__sp_Q9FF80_SUVH1_ARATH
TRsanscaffold_20075230	Alkaloid	NMT	low	borderline	NMT__00048__sp_Q8W595_SUVR4_ARATH
TRsanscaffold_20075850	Alkaloid	NMT	medium	borderline	NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
TRsanscaffold_20080510	Alkaloid	NMT	low	borderline	NMT__00067__sp_Q9T0G7_SUVH9_ARATH
TRsanscaffold_20083160	Alkaloid	NMT	low	borderline	NMT__00067__sp_Q9T0G7_SUVH9_ARATH
TRsanscaffold_20085660	Alkaloid	NMT	low	borderline	NMT__00024__sp_P0CB22_ATX2_ARATH
TRsanscaffold_20085790	Alkaloid	NMT	low	borderline	NMT__00020__sp_O23372_ATXR3_ARATH
TRsanscaffold_20090810	Alkaloid	NMT	medium	borderline	NMT__00002__sp_A0A075D6M1_NNMT_RAUSE
TRsanscaffold_20102410	Alkaloid	NMT	medium	borderline	NMT__00006__sp_A0A6C0WW38_CKCS_CAMSB
TRsanscaffold_30112660	Alkaloid	NMT	medium	pass	NMT__00068__sp_Q9XI84_RBCMT_ARATH
TRsanscaffold_40123800	Alkaloid	NMT	medium	borderline	NMT__00011__sp_A9X7L0_ANMT_RUTGR
TRsanscaffold_40127570	Alkaloid	NMT	low	borderline	NMT__00035__sp_Q6K431_TRX1_ORYSJ
TRsanscaffold_40128570	Alkaloid	NMT	low	borderline	NMT__00056__sp_Q9FNE9_ATXR6_ARATH
TRsanscaffold_40129080	Alkaloid	NMT	medium	pass	NMT__00032__sp_Q5PP37_ATXR2_ARATH
TRsanscaffold_40129570	Alkaloid	NMT	medium	pass	NMT__00047__sp_Q8VZJ1_ATXR5_ARATH
TRsanscaffold_40137800	Alkaloid	NMT	low	borderline	NMT__00021__sp_O64827_SUVR5_ARATH
TRsanscaffold_40140320	Alkaloid	NMT	medium	borderline	NMT__00011__sp_A9X7L0_ANMT_RUTGR
TRsanscaffold_50150270	Alkaloid	NMT	low	borderline	NMT__00056__sp_Q9FNE9_ATXR6_ARATH
TRsanscaffold_50151490	Alkaloid	NMT	medium	pass	NMT__00061__sp_Q9SAH5_PLMT_ARATH
TRsanscaffold_50155630	Alkaloid	NMT	low	borderline	NMT__00016__sp_F4JNX3_CMKMT_ARATH
TRsanscaffold_60162040	Alkaloid	NMT	medium	borderline	NMT__00011__sp_A9X7L0_ANMT_RUTGR
TRsanscaffold_60173990	Alkaloid	NMT	low	borderline	NMT__00039__sp_Q84W92_ANM13_ARATH
TRsanscaffold_60174110	Alkaloid	NMT	medium	borderline	NMT__00023__sp_O82210_ANM12_ARATH
TRsanscaffold_60182530	Alkaloid	NMT	low	borderline	NMT__00028__sp_Q2LAE1_ASHH2_ARATH
TRsanscaffold_60183580	Alkaloid	NMT	medium	pass	NMT__00042__sp_Q8GZB6_SUVH4_ARATH
TRsanscaffold_60183600	Alkaloid	NMT	medium	pass	NMT__00019__sp_O22781_SUVH2_ARATH
TRsanscaffold_70189330	Alkaloid	NMT	low	borderline	NMT__00023__sp_O82210_ANM12_ARATH
TRsanscaffold_70194540	Alkaloid	NMT	low	borderline	NMT__00025__sp_P93831_CLF_ARATH
TRsanscaffold_80198310	Alkaloid	NMT	low	borderline	NMT__00017__sp_F4K1J4_ATXR7_ARATH
TRsanscaffold_80211140	Alkaloid	NMT	medium	pass	NMT__00019__sp_O22781_SUVH2_ARATH
TRsanscaffold_80211200	Alkaloid	NMT	medium	borderline	NMT__00011__sp_A9X7L0_ANMT_RUTGR
TRsanscaffold_80212510	Alkaloid	NMT	low	borderline	NMT__00035__sp_Q6K431_TRX1_ORYSJ