PlantSME Plant secondary metabolism enzyme database

Trocholejeunea sandvicensis (trocholejeunea_sandvicensis)

Imported from atlas release summary for Trocholejeunea sandvicensis.

863
Candidate Protein Records
526
Pathway-Level Records
1651
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 144 10 POD (73) View species results
Terpenoid pathway 118 19 BAHD (52) View species results
Alkaloid pathway 115 18 NMT (19) View species results
Rosmarinic acid pathway 59 7 C4H (31) View species results
Flavonoid pathway 52 9 IFR (17) View species results
Steroid pathway 38 12 SMT1/SMT2/SMT3 (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 686 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 146 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TRI/TRII
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Protein/Isoform Record Pathway Family Confidence Status Best Target
TRsanscaffold_10002240 Alkaloid TRI/TRII low borderline TRI_TRII__00005__sp_P50162_TRN1_DATST
TRsanscaffold_100023890 Alkaloid TRI/TRII medium pass TRI_TRII__00001__sp_A7DY56_TRN1_COCOF
TRsanscaffold_100029050 Alkaloid TRI/TRII medium pass TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
TRsanscaffold_100029690 Alkaloid TRI/TRII medium pass TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH
TRsanscaffold_10012530 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
TRsanscaffold_120050760 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
TRsanscaffold_20065030 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
TRsanscaffold_20078020 Alkaloid TRI/TRII medium pass TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
TRsanscaffold_20084310 Alkaloid TRI/TRII low borderline TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH
TRsanscaffold_230104330 Alkaloid TRI/TRII medium pass TRI_TRII__00005__sp_P50162_TRN1_DATST
TRsanscaffold_30108090 Alkaloid TRI/TRII medium pass TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH
TRsanscaffold_40125130 Alkaloid TRI/TRII medium pass TRI_TRII__00001__sp_A7DY56_TRN1_COCOF
TRsanscaffold_40146290 Alkaloid TRI/TRII medium pass TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH
TRsanscaffold_60167810 Alkaloid TRI/TRII medium pass TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH
TRsanscaffold_60169720 Alkaloid TRI/TRII low borderline TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH
TRsanscaffold_60179320 Alkaloid TRI/TRII low borderline TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH
TRsanscaffold_60184410 Alkaloid TRI/TRII low borderline TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
TRsanscaffold_70189240 Alkaloid TRI/TRII low borderline TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH
TRsanscaffold_70189930 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
TRsanscaffold_80208810 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
TRsanscaffold_90218850 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB