PlantSME Plant secondary metabolism enzyme database

Trocholejeunea sandvicensis (trocholejeunea_sandvicensis)

Imported from atlas release summary for Trocholejeunea sandvicensis.

526
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 144 10 POD (73) View species results
Terpenoid pathway 118 19 BAHD (52) View species results
Alkaloid pathway 115 18 NMT (19) View species results
Rosmarinic acid pathway 59 7 C4H (31) View species results
Flavonoid pathway 52 9 IFR (17) View species results
Steroid pathway 38 12 SMT1/SMT2/SMT3 (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 686 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 146 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3'H/CYP75B
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Gene Pathway Family Confidence Status
TRsanscaffold_100014680 Flavonoid F3'H/CYP75B medium borderline
TRsanscaffold_10005970 Flavonoid F3'H/CYP75B medium borderline
TRsanscaffold_10006290 Flavonoid F3'H/CYP75B medium borderline
TRsanscaffold_10007260 Flavonoid F3'H/CYP75B medium borderline
TRsanscaffold_110041950 Flavonoid F3'H/CYP75B medium borderline
TRsanscaffold_110045360 Flavonoid F3'H/CYP75B low borderline
TRsanscaffold_110049110 Flavonoid F3'H/CYP75B medium borderline
TRsanscaffold_120050500 Flavonoid F3'H/CYP75B medium borderline
TRsanscaffold_120051210 Flavonoid F3'H/CYP75B medium borderline
TRsanscaffold_20065870 Flavonoid F3'H/CYP75B medium borderline
TRsanscaffold_20078920 Flavonoid F3'H/CYP75B medium borderline
TRsanscaffold_20096860 Flavonoid F3'H/CYP75B medium borderline
TRsanscaffold_20096970 Flavonoid F3'H/CYP75B medium borderline
TRsanscaffold_20096980 Flavonoid F3'H/CYP75B medium borderline
TRsanscaffold_20097010 Flavonoid F3'H/CYP75B medium borderline
TRsanscaffold_20097040 Flavonoid F3'H/CYP75B medium borderline
TRsanscaffold_20097050 Flavonoid F3'H/CYP75B medium borderline
TRsanscaffold_20100810 Flavonoid F3'H/CYP75B medium borderline
TRsanscaffold_20103230 Flavonoid F3'H/CYP75B medium borderline
TRsanscaffold_30106970 Flavonoid F3'H/CYP75B medium borderline
TRsanscaffold_30106980 Flavonoid F3'H/CYP75B medium borderline
TRsanscaffold_30106990 Flavonoid F3'H/CYP75B medium borderline
TRsanscaffold_30107000 Flavonoid F3'H/CYP75B medium borderline
TRsanscaffold_30108320 Flavonoid F3'H/CYP75B medium pass
TRsanscaffold_30108720 Flavonoid F3'H/CYP75B medium borderline
TRsanscaffold_30110890 Flavonoid F3'H/CYP75B medium borderline
TRsanscaffold_40144140 Flavonoid F3'H/CYP75B medium borderline
TRsanscaffold_50147240 Flavonoid F3'H/CYP75B medium borderline
TRsanscaffold_50159590 Flavonoid F3'H/CYP75B low borderline
TRsanscaffold_50160560 Flavonoid F3'H/CYP75B medium borderline
TRsanscaffold_60166130 Flavonoid F3'H/CYP75B medium borderline
TRsanscaffold_60171040 Flavonoid F3'H/CYP75B low borderline
TRsanscaffold_60179850 Flavonoid F3'H/CYP75B medium borderline
TRsanscaffold_60186170 Flavonoid F3'H/CYP75B medium borderline
TRsanscaffold_70197550 Flavonoid F3'H/CYP75B medium borderline
TRsanscaffold_80203270 Flavonoid F3'H/CYP75B medium borderline
TRsanscaffold_80205660 Flavonoid F3'H/CYP75B medium borderline