PlantSME Plant secondary metabolism enzyme database

Trocholejeunea sandvicensis (trocholejeunea_sandvicensis)

Imported from atlas release summary for Trocholejeunea sandvicensis.

863
Candidate Protein Records
526
Pathway-Level Records
1651
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 144 10 POD (73) View species results
Terpenoid pathway 118 19 BAHD (52) View species results
Alkaloid pathway 115 18 NMT (19) View species results
Rosmarinic acid pathway 59 7 C4H (31) View species results
Flavonoid pathway 52 9 IFR (17) View species results
Steroid pathway 38 12 SMT1/SMT2/SMT3 (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 686 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 146 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
TRsanscaffold_60167440 Phenylpropanoid POD low borderline
TRsanscaffold_60168910 Phenylpropanoid POD medium pass
TRsanscaffold_60178700 Phenylpropanoid POD medium pass
TRsanscaffold_60178760 Phenylpropanoid POD medium pass
TRsanscaffold_60178770 Phenylpropanoid POD medium pass
TRsanscaffold_60178800 Phenylpropanoid POD medium pass
TRsanscaffold_60178920 Phenylpropanoid POD medium pass
TRsanscaffold_60179020 Phenylpropanoid POD medium pass
TRsanscaffold_60179140 Phenylpropanoid POD medium pass
TRsanscaffold_60179150 Phenylpropanoid POD medium pass
TRsanscaffold_60179810 Phenylpropanoid POD medium pass
TRsanscaffold_60180810 Phenylpropanoid POD medium pass
TRsanscaffold_60182350 Phenylpropanoid POD medium pass
TRsanscaffold_60183400 Phenylpropanoid POD medium pass
TRsanscaffold_70190310 Phenylpropanoid POD medium pass
TRsanscaffold_70197480 Phenylpropanoid POD medium pass
TRsanscaffold_80206560 Phenylpropanoid POD medium pass
TRsanscaffold_80210940 Phenylpropanoid POD medium pass
TRsanscaffold_90214930 Phenylpropanoid POD medium pass
TRsanscaffold_90216000 Phenylpropanoid POD medium pass
TRsanscaffold_90216030 Phenylpropanoid POD medium pass
TRsanscaffold_90217340 Phenylpropanoid POD medium pass
TRsanscaffold_90217980 Phenylpropanoid POD medium pass
TRsanscaffold_90221300 Phenylpropanoid POD medium pass
TRsanscaffold_90221350 Phenylpropanoid POD medium pass
TRsanscaffold_90226350 Phenylpropanoid POD medium pass
TRsanscaffold_90226360 Phenylpropanoid POD medium pass
TRsanscaffold_90226370 Phenylpropanoid POD medium pass
TRsanscaffold_10000600 Rosmarinic Acid 4CL medium pass
TRsanscaffold_100039860 Rosmarinic Acid 4CL low borderline
TRsanscaffold_10007890 Rosmarinic Acid 4CL medium pass
TRsanscaffold_10007980 Rosmarinic Acid 4CL medium pass
TRsanscaffold_110041990 Rosmarinic Acid 4CL low borderline
TRsanscaffold_120051830 Rosmarinic Acid 4CL low borderline
TRsanscaffold_20070540 Rosmarinic Acid 4CL medium pass
TRsanscaffold_30104990 Rosmarinic Acid 4CL low borderline
TRsanscaffold_40130210 Rosmarinic Acid 4CL low borderline
TRsanscaffold_60164720 Rosmarinic Acid 4CL low borderline
TRsanscaffold_60168610 Rosmarinic Acid 4CL low borderline
TRsanscaffold_60180720 Rosmarinic Acid 4CL medium pass
TRsanscaffold_60180730 Rosmarinic Acid 4CL medium pass
TRsanscaffold_60180750 Rosmarinic Acid 4CL medium pass
TRsanscaffold_60182910 Rosmarinic Acid 4CL medium pass
TRsanscaffold_60183320 Rosmarinic Acid 4CL low borderline
TRsanscaffold_70189890 Rosmarinic Acid 4CL low borderline
TRsanscaffold_70195810 Rosmarinic Acid 4CL low borderline
TRsanscaffold_80210280 Rosmarinic Acid 4CL low borderline
TRsanscaffold_90216640 Rosmarinic Acid 4CL medium pass
TRsanscaffold_90217590 Rosmarinic Acid 4CL low borderline
TRsanscaffold_90223930 Rosmarinic Acid 4CL medium pass