PlantSME Plant secondary metabolism enzyme database

Trocholejeunea sandvicensis (trocholejeunea_sandvicensis)

Imported from atlas release summary for Trocholejeunea sandvicensis.

863
Candidate Protein Records
526
Pathway-Level Records
1651
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 144 10 POD (73) View species results
Terpenoid pathway 118 19 BAHD (52) View species results
Alkaloid pathway 115 18 NMT (19) View species results
Rosmarinic acid pathway 59 7 C4H (31) View species results
Flavonoid pathway 52 9 IFR (17) View species results
Steroid pathway 38 12 SMT1/SMT2/SMT3 (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 686 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 146 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
TRsanscaffold_90220210 Terpenoid GGPPS medium borderline
TRsanscaffold_90224100 Terpenoid GGPPS medium borderline
TRsanscaffold_100026550 Terpenoid HDR/IspH high pass
TRsanscaffold_80210010 Terpenoid HDR/IspH high pass
TRsanscaffold_100026560 Terpenoid HDS/IspG high pass
TRsanscaffold_160059000 Terpenoid HMGR medium pass
TRsanscaffold_80203630 Terpenoid HMGS high pass
TRsanscaffold_170060500 Terpenoid IDI low borderline
TRsanscaffold_40143110 Terpenoid IDI medium pass
TRsanscaffold_100038800 Terpenoid MCT/IspD high pass
TRsanscaffold_20085390 Terpenoid MCT/IspD low borderline
TRsanscaffold_90225320 Terpenoid MCT/IspD low borderline
TRsanscaffold_60169410 Terpenoid MDS/IspF high pass
TRsanscaffold_100031380 Terpenoid MVD low borderline
TRsanscaffold_10011140 Terpenoid MVD medium pass
TRsanscaffold_70195450 Terpenoid MVD medium pass
TRsanscaffold_100021560 Terpenoid MVK low borderline
TRsanscaffold_40120200 Terpenoid MVK low borderline
TRsanscaffold_40145380 Terpenoid MVK medium pass
TRsanscaffold_70191800 Terpenoid MVK low borderline
TRsanscaffold_80206820 Terpenoid PMK medium pass
TRsanscaffold_80210720 Terpenoid PMK low borderline
TRsanscaffold_100017560 Terpenoid TPS medium pass
TRsanscaffold_30107030 Terpenoid TPS medium pass
TRsanscaffold_30114610 Terpenoid TPS low borderline
TRsanscaffold_40119250 Terpenoid TPS medium pass
TRsanscaffold_40134180 Terpenoid TPS medium pass
TRsanscaffold_40134200 Terpenoid TPS medium pass
TRsanscaffold_40146140 Terpenoid TPS low borderline
TRsanscaffold_100018870 Terpenoid UGT low borderline
TRsanscaffold_20065210 Terpenoid UGT low borderline
TRsanscaffold_20065220 Terpenoid UGT medium pass
TRsanscaffold_20065900 Terpenoid UGT medium pass
TRsanscaffold_20069390 Terpenoid UGT low borderline
TRsanscaffold_20083860 Terpenoid UGT medium pass
TRsanscaffold_20101770 Terpenoid UGT low borderline
TRsanscaffold_30112830 Terpenoid UGT medium pass
TRsanscaffold_40124400 Terpenoid UGT medium pass
TRsanscaffold_50149550 Terpenoid UGT low borderline
TRsanscaffold_50156120 Terpenoid UGT low borderline
TRsanscaffold_50158310 Terpenoid UGT low borderline
TRsanscaffold_50161430 Terpenoid UGT medium pass
TRsanscaffold_60164280 Terpenoid UGT low borderline
TRsanscaffold_60176860 Terpenoid UGT low borderline
TRsanscaffold_60177850 Terpenoid UGT medium pass
TRsanscaffold_60178040 Terpenoid UGT low borderline
TRsanscaffold_60178070 Terpenoid UGT low borderline
TRsanscaffold_70188000 Terpenoid UGT low borderline
TRsanscaffold_70197170 Terpenoid UGT medium pass
TRsanscaffold_80210530 Terpenoid UGT medium pass