PlantSME Plant secondary metabolism enzyme database

Trocholejeunea sandvicensis (trocholejeunea_sandvicensis)

Imported from atlas release summary for Trocholejeunea sandvicensis.

863
Candidate Protein Records
526
Pathway-Level Records
1651
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 144 10 POD (73) View species results
Terpenoid pathway 118 19 BAHD (52) View species results
Alkaloid pathway 115 18 NMT (19) View species results
Rosmarinic acid pathway 59 7 C4H (31) View species results
Flavonoid pathway 52 9 IFR (17) View species results
Steroid pathway 38 12 SMT1/SMT2/SMT3 (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 686 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 146 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
TRsanscaffold_60173990 Alkaloid NMT low borderline
TRsanscaffold_60174110 Alkaloid NMT medium borderline
TRsanscaffold_60182530 Alkaloid NMT low borderline
TRsanscaffold_60183580 Alkaloid NMT medium pass
TRsanscaffold_60183600 Alkaloid NMT medium pass
TRsanscaffold_70189330 Alkaloid NMT low borderline
TRsanscaffold_70194540 Alkaloid NMT low borderline
TRsanscaffold_80198310 Alkaloid NMT low borderline
TRsanscaffold_80211140 Alkaloid NMT medium pass
TRsanscaffold_80211200 Alkaloid NMT medium borderline
TRsanscaffold_80212510 Alkaloid NMT low borderline
TRsanscaffold_90214050 Alkaloid NMT medium pass
TRsanscaffold_90214140 Alkaloid NMT medium borderline
TRsanscaffold_90224730 Alkaloid NMT medium pass
TRsanscaffold_120050930 Alkaloid PMT low borderline
TRsanscaffold_120054250 Alkaloid PMT medium pass
TRsanscaffold_20102640 Alkaloid PMT low borderline
TRsanscaffold_90225940 Alkaloid PMT medium borderline
TRsanscaffold_20078000 Alkaloid PYKS medium pass
TRsanscaffold_20080830 Alkaloid PYKS low borderline
TRsanscaffold_20082960 Alkaloid PYKS medium pass
TRsanscaffold_40126980 Alkaloid PYKS medium pass
TRsanscaffold_40126990 Alkaloid PYKS high pass
TRsanscaffold_40144330 Alkaloid PYKS high pass
TRsanscaffold_60171670 Alkaloid PYKS low borderline
TRsanscaffold_80205060 Alkaloid PYKS low borderline
TRsanscaffold_80212600 Alkaloid PYKS low borderline
TRsanscaffold_90225740 Alkaloid PYKS high pass
TRsanscaffold_100024770 Alkaloid SGD medium pass
TRsanscaffold_100024790 Alkaloid SGD medium pass
TRsanscaffold_100031020 Alkaloid SGD low borderline
TRsanscaffold_100032110 Alkaloid SGD medium pass
TRsanscaffold_100032120 Alkaloid SGD medium pass
TRsanscaffold_160059230 Alkaloid SGD low borderline
TRsanscaffold_20087140 Alkaloid SGD medium pass
TRsanscaffold_20094750 Alkaloid SGD medium pass
TRsanscaffold_40130960 Alkaloid SGD low borderline
TRsanscaffold_100016110 Alkaloid SLS medium borderline
TRsanscaffold_10003770 Alkaloid SLS medium borderline
TRsanscaffold_110045360 Alkaloid SLS medium borderline
TRsanscaffold_20083470 Alkaloid SLS medium borderline
TRsanscaffold_60171040 Alkaloid SLS medium borderline
TRsanscaffold_100013070 Alkaloid STR medium pass
TRsanscaffold_10001550 Alkaloid STR low borderline
TRsanscaffold_100016420 Alkaloid STR medium pass
TRsanscaffold_100020390 Alkaloid STR low borderline
TRsanscaffold_100026580 Alkaloid STR low borderline
TRsanscaffold_100026610 Alkaloid STR low borderline
TRsanscaffold_10002860 Alkaloid STR low borderline
TRsanscaffold_100029780 Alkaloid STR low borderline