PlantSME Plant secondary metabolism enzyme database

Trocholejeunea sandvicensis (trocholejeunea_sandvicensis)

Imported from atlas release summary for Trocholejeunea sandvicensis.

863
Candidate Protein Records
526
Pathway-Level Records
1651
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 144 10 POD (73) View species results
Terpenoid pathway 118 19 BAHD (52) View species results
Alkaloid pathway 115 18 NMT (19) View species results
Rosmarinic acid pathway 59 7 C4H (31) View species results
Flavonoid pathway 52 9 IFR (17) View species results
Steroid pathway 38 12 SMT1/SMT2/SMT3 (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 686 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 146 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
TRsanscaffold_30110900 Alkaloid T3O medium borderline
TRsanscaffold_30115580 Alkaloid T3O medium borderline
TRsanscaffold_40123620 Alkaloid T3O low borderline
TRsanscaffold_40136570 Alkaloid T3O medium borderline
TRsanscaffold_40142500 Alkaloid T3O medium pass
TRsanscaffold_40144140 Alkaloid T3O medium borderline
TRsanscaffold_40145690 Alkaloid T3O medium pass
TRsanscaffold_50154930 Alkaloid T3O medium pass
TRsanscaffold_50159700 Alkaloid T3O medium borderline
TRsanscaffold_60169620 Alkaloid T3O medium pass
TRsanscaffold_60173450 Alkaloid T3O medium borderline
TRsanscaffold_60178580 Alkaloid T3O medium pass
TRsanscaffold_60181040 Alkaloid T3O medium borderline
TRsanscaffold_60181080 Alkaloid T3O medium borderline
TRsanscaffold_60181100 Alkaloid T3O medium borderline
TRsanscaffold_60181110 Alkaloid T3O medium borderline
TRsanscaffold_60182070 Alkaloid T3O medium pass
TRsanscaffold_60184280 Alkaloid T3O medium borderline
TRsanscaffold_60185130 Alkaloid T3O medium borderline
TRsanscaffold_60185180 Alkaloid T3O medium borderline
TRsanscaffold_70197550 Alkaloid T3O medium borderline
TRsanscaffold_80203270 Alkaloid T3O medium borderline
TRsanscaffold_80208880 Alkaloid T3O medium pass
TRsanscaffold_90216840 Alkaloid T3O medium borderline
TRsanscaffold_20086170 Alkaloid TDC low borderline
TRsanscaffold_10002240 Alkaloid TRI/TRII low borderline
TRsanscaffold_100023890 Alkaloid TRI/TRII medium pass
TRsanscaffold_100029050 Alkaloid TRI/TRII medium pass
TRsanscaffold_100029690 Alkaloid TRI/TRII medium pass
TRsanscaffold_10012530 Alkaloid TRI/TRII medium pass
TRsanscaffold_120050760 Alkaloid TRI/TRII medium pass
TRsanscaffold_20065030 Alkaloid TRI/TRII medium pass
TRsanscaffold_20078020 Alkaloid TRI/TRII medium pass
TRsanscaffold_20084310 Alkaloid TRI/TRII low borderline
TRsanscaffold_230104330 Alkaloid TRI/TRII medium pass
TRsanscaffold_30108090 Alkaloid TRI/TRII medium pass
TRsanscaffold_40125130 Alkaloid TRI/TRII medium pass
TRsanscaffold_40146290 Alkaloid TRI/TRII medium pass
TRsanscaffold_60167810 Alkaloid TRI/TRII medium pass
TRsanscaffold_60169720 Alkaloid TRI/TRII low borderline
TRsanscaffold_60179320 Alkaloid TRI/TRII low borderline
TRsanscaffold_60184410 Alkaloid TRI/TRII low borderline
TRsanscaffold_70189240 Alkaloid TRI/TRII low borderline
TRsanscaffold_70189930 Alkaloid TRI/TRII medium pass
TRsanscaffold_80208810 Alkaloid TRI/TRII medium pass
TRsanscaffold_90218850 Alkaloid TRI/TRII medium pass
TRsanscaffold_60173580 Alkaloid TYDC_DDC medium borderline
TRsanscaffold_20103310 Alkaloid XMT_MXMT_DXMT medium borderline
TRsanscaffold_50157450 Alkaloid XMT_MXMT_DXMT medium borderline
TRsanscaffold_60183980 Alkaloid XMT_MXMT_DXMT low borderline