PlantSME Plant secondary metabolism enzyme database

Archidium alternifolium (archidium_alternifolium)

Imported from atlas release summary for Archidium alternifolium.

1162
Candidate Protein Records
891
Pathway-Level Records
2303
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 259 11 POD (97) View species results
Terpenoid pathway 190 20 BAHD (58) View species results
Alkaloid pathway 161 19 PYKS (29) View species results
Flavonoid pathway 135 10 PAL (38) View species results
Rosmarinic acid pathway 95 7 PAL (38) View species results
Steroid pathway 51 12 CAS (20) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 897 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 126 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Aaltescaffold_100115180 Alkaloid T3O medium borderline
Aaltescaffold_100120280 Alkaloid T3O medium borderline
Aaltescaffold_10017420 Alkaloid T3O low borderline
Aaltescaffold_20186850 Alkaloid T3O medium borderline
Aaltescaffold_20194750 Alkaloid T3O medium borderline
Aaltescaffold_20210690 Alkaloid T3O medium borderline
Aaltescaffold_20210720 Alkaloid T3O low borderline
Aaltescaffold_20221720 Alkaloid T3O medium borderline
Aaltescaffold_30294600 Alkaloid T3O low borderline
Aaltescaffold_30307250 Alkaloid T3O medium pass
Aaltescaffold_30308470 Alkaloid T3O medium borderline
Aaltescaffold_40324910 Alkaloid T3O medium pass
Aaltescaffold_40332540 Alkaloid T3O medium pass
Aaltescaffold_40335230 Alkaloid T3O medium pass
Aaltescaffold_40342460 Alkaloid T3O medium borderline
Aaltescaffold_40352470 Alkaloid T3O medium borderline
Aaltescaffold_40352660 Alkaloid T3O medium borderline
Aaltescaffold_50368770 Alkaloid T3O medium borderline
Aaltescaffold_50376140 Alkaloid T3O medium borderline
Aaltescaffold_50400100 Alkaloid T3O medium pass
Aaltescaffold_50407790 Alkaloid T3O medium borderline
Aaltescaffold_50407890 Alkaloid T3O medium borderline
Aaltescaffold_50407910 Alkaloid T3O medium borderline
Aaltescaffold_50407960 Alkaloid T3O medium borderline
Aaltescaffold_50408440 Alkaloid T3O low borderline
Aaltescaffold_60422670 Alkaloid T3O medium borderline
Aaltescaffold_60427060 Alkaloid T3O low borderline
Aaltescaffold_60437060 Alkaloid T3O medium borderline
Aaltescaffold_60439540 Alkaloid T3O medium pass
Aaltescaffold_70442990 Alkaloid T3O medium pass
Aaltescaffold_70445600 Alkaloid T3O medium borderline
Aaltescaffold_70449280 Alkaloid T3O medium pass
Aaltescaffold_70461770 Alkaloid T3O medium borderline
Aaltescaffold_80492400 Alkaloid T3O medium pass
Aaltescaffold_80501090 Alkaloid T3O low borderline
Aaltescaffold_90507480 Alkaloid T3O low borderline
Aaltescaffold_90522360 Alkaloid T3O medium borderline
Aaltescaffold_100095460 Alkaloid TDC low borderline
Aaltescaffold_100095580 Alkaloid TDC low borderline
Aaltescaffold_100102310 Alkaloid TDC low borderline
Aaltescaffold_10042000 Alkaloid TDC low borderline
Aaltescaffold_10042080 Alkaloid TDC low borderline
Aaltescaffold_10042090 Alkaloid TDC low borderline
Aaltescaffold_60436040 Alkaloid TDC medium borderline
Aaltescaffold_100120850 Alkaloid TRI/TRII medium pass
Aaltescaffold_10060990 Alkaloid TRI/TRII low borderline
Aaltescaffold_10062880 Alkaloid TRI/TRII low borderline
Aaltescaffold_10074030 Alkaloid TRI/TRII medium pass
Aaltescaffold_20217620 Alkaloid TRI/TRII medium pass
Aaltescaffold_30248160 Alkaloid TRI/TRII medium pass