PlantSME Plant secondary metabolism enzyme database

Archidium alternifolium (archidium_alternifolium)

Imported from atlas release summary for Archidium alternifolium.

1162
Candidate Protein Records
891
Pathway-Level Records
2303
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 259 11 POD (97) View species results
Terpenoid pathway 190 20 BAHD (58) View species results
Alkaloid pathway 161 19 PYKS (29) View species results
Flavonoid pathway 135 10 PAL (38) View species results
Rosmarinic acid pathway 95 7 PAL (38) View species results
Steroid pathway 51 12 CAS (20) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 897 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 126 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Aaltescaffold_20185880 Phenylpropanoid COMT medium pass
Aaltescaffold_20186870 Phenylpropanoid COMT medium pass
Aaltescaffold_20186990 Phenylpropanoid COMT low borderline
Aaltescaffold_20187130 Phenylpropanoid COMT low borderline
Aaltescaffold_20187140 Phenylpropanoid COMT medium pass
Aaltescaffold_20187150 Phenylpropanoid COMT low borderline
Aaltescaffold_20187260 Phenylpropanoid COMT medium pass
Aaltescaffold_20192940 Phenylpropanoid COMT low borderline
Aaltescaffold_20196090 Phenylpropanoid COMT medium pass
Aaltescaffold_20209620 Phenylpropanoid COMT medium pass
Aaltescaffold_20210150 Phenylpropanoid COMT medium pass
Aaltescaffold_20210160 Phenylpropanoid COMT medium pass
Aaltescaffold_40329390 Phenylpropanoid COMT medium pass
Aaltescaffold_40340720 Phenylpropanoid COMT medium pass
Aaltescaffold_40340750 Phenylpropanoid COMT medium pass
Aaltescaffold_60423450 Phenylpropanoid COMT medium pass
Aaltescaffold_60423670 Phenylpropanoid COMT medium pass
Aaltescaffold_60429630 Phenylpropanoid COMT medium pass
Aaltescaffold_60433220 Phenylpropanoid COMT medium pass
Aaltescaffold_60433670 Phenylpropanoid COMT medium pass
Aaltescaffold_60433680 Phenylpropanoid COMT medium pass
Aaltescaffold_60433730 Phenylpropanoid COMT medium pass
Aaltescaffold_60433820 Phenylpropanoid COMT medium pass
Aaltescaffold_60433830 Phenylpropanoid COMT medium pass
Aaltescaffold_60433860 Phenylpropanoid COMT medium pass
Aaltescaffold_60434020 Phenylpropanoid COMT medium pass
Aaltescaffold_60434030 Phenylpropanoid COMT medium pass
Aaltescaffold_70450840 Phenylpropanoid COMT medium pass
Aaltescaffold_70452860 Phenylpropanoid COMT medium pass
Aaltescaffold_70455240 Phenylpropanoid COMT medium pass
Aaltescaffold_70457270 Phenylpropanoid COMT medium pass
Aaltescaffold_80470140 Phenylpropanoid COMT low borderline
Aaltescaffold_80470230 Phenylpropanoid COMT medium pass
Aaltescaffold_90525540 Phenylpropanoid COMT medium pass
Aaltescaffold_10047080 Phenylpropanoid CSE medium pass
Aaltescaffold_160178820 Phenylpropanoid CSE low borderline
Aaltescaffold_20192910 Phenylpropanoid CSE medium pass
Aaltescaffold_20204460 Phenylpropanoid CSE medium pass
Aaltescaffold_20208110 Phenylpropanoid CSE medium pass
Aaltescaffold_30287050 Phenylpropanoid CSE medium pass
Aaltescaffold_40345970 Phenylpropanoid CSE medium pass
Aaltescaffold_50365790 Phenylpropanoid CSE medium pass
Aaltescaffold_50396250 Phenylpropanoid CSE medium pass
Aaltescaffold_60421060 Phenylpropanoid CSE low borderline
Aaltescaffold_70446440 Phenylpropanoid CSE medium pass
Aaltescaffold_90517540 Phenylpropanoid CSE low borderline
Aaltescaffold_90517600 Phenylpropanoid CSE low borderline
Aaltescaffold_90525420 Phenylpropanoid CSE medium pass
Aaltescaffold_10042180 Phenylpropanoid F5H/CYP84A medium borderline
Aaltescaffold_20211460 Phenylpropanoid F5H/CYP84A medium borderline