PlantSME Plant secondary metabolism enzyme database

Archidium alternifolium (archidium_alternifolium)

Imported from atlas release summary for Archidium alternifolium.

1162
Candidate Protein Records
891
Pathway-Level Records
2303
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 259 11 POD (97) View species results
Terpenoid pathway 190 20 BAHD (58) View species results
Alkaloid pathway 161 19 PYKS (29) View species results
Flavonoid pathway 135 10 PAL (38) View species results
Rosmarinic acid pathway 95 7 PAL (38) View species results
Steroid pathway 51 12 CAS (20) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 897 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 126 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Aaltescaffold_40327350 Rosmarinic Acid PAL medium pass
Aaltescaffold_40328210 Rosmarinic Acid PAL medium pass
Aaltescaffold_40328220 Rosmarinic Acid PAL medium pass
Aaltescaffold_40330020 Rosmarinic Acid PAL high pass
Aaltescaffold_50374440 Rosmarinic Acid PAL high pass
Aaltescaffold_50374480 Rosmarinic Acid PAL high pass
Aaltescaffold_50396030 Rosmarinic Acid PAL medium pass
Aaltescaffold_70461840 Rosmarinic Acid PAL medium pass
Aaltescaffold_70461850 Rosmarinic Acid PAL high pass
Aaltescaffold_70461860 Rosmarinic Acid PAL medium pass
Aaltescaffold_80484670 Rosmarinic Acid PAL high pass
Aaltescaffold_90523420 Rosmarinic Acid PAL high pass
Aaltescaffold_90523440 Rosmarinic Acid PAL high pass
Aaltescaffold_90523810 Rosmarinic Acid PAL high pass
Aaltescaffold_100084650 Rosmarinic Acid RAS medium pass
Aaltescaffold_10036370 Rosmarinic Acid RAS medium pass
Aaltescaffold_20232150 Rosmarinic Acid RAS low borderline
Aaltescaffold_40323570 Rosmarinic Acid RAS low borderline
Aaltescaffold_40331340 Rosmarinic Acid RAS medium pass
Aaltescaffold_60415940 Rosmarinic Acid RAS low borderline
Aaltescaffold_60428620 Rosmarinic Acid RAS medium pass
Aaltescaffold_60435350 Rosmarinic Acid RAS low borderline
Aaltescaffold_60435390 Rosmarinic Acid RAS low borderline
Aaltescaffold_80479490 Rosmarinic Acid RAS medium pass
Aaltescaffold_80482220 Rosmarinic Acid RAS low borderline
Aaltescaffold_80482450 Rosmarinic Acid RAS low borderline
Aaltescaffold_90512220 Rosmarinic Acid RAS low borderline
Aaltescaffold_10028510 Rosmarinic Acid TAT low borderline
Aaltescaffold_20206340 Rosmarinic Acid TAT medium pass
Aaltescaffold_40333540 Rosmarinic Acid TAT low borderline
Aaltescaffold_40351060 Rosmarinic Acid TAT medium pass
Aaltescaffold_50366970 Rosmarinic Acid TAT medium pass
Aaltescaffold_60435370 Rosmarinic Acid TAT low borderline
Aaltescaffold_70447740 Rosmarinic Acid TAT medium pass
Aaltescaffold_10050710 Steroid BR6OX1/CYP85A1 low borderline
Aaltescaffold_40336670 Steroid BR6OX1/CYP85A1 low borderline
Aaltescaffold_50370530 Steroid BR6OX1/CYP85A1 low borderline
Aaltescaffold_50396730 Steroid BR6OX1/CYP85A1 low borderline
Aaltescaffold_60423680 Steroid BR6OX1/CYP85A1 low borderline
Aaltescaffold_60434230 Steroid BR6OX1/CYP85A1 medium borderline
Aaltescaffold_100084370 Steroid BR6OX2/CYP85A2 low borderline
Aaltescaffold_100084610 Steroid BR6OX2/CYP85A2 low borderline
Aaltescaffold_100085420 Steroid BR6OX2/CYP85A2 medium borderline
Aaltescaffold_100086470 Steroid BR6OX2/CYP85A2 low borderline
Aaltescaffold_100086480 Steroid BR6OX2/CYP85A2 low borderline
Aaltescaffold_100086490 Steroid BR6OX2/CYP85A2 low borderline
Aaltescaffold_100086500 Steroid BR6OX2/CYP85A2 low borderline
Aaltescaffold_100095640 Steroid BR6OX2/CYP85A2 low borderline
Aaltescaffold_100106570 Steroid BR6OX2/CYP85A2 low borderline
Aaltescaffold_10033710 Steroid BR6OX2/CYP85A2 low borderline