PlantSME Plant secondary metabolism enzyme database

Archidium alternifolium (archidium_alternifolium)

Imported from atlas release summary for Archidium alternifolium.

1162
Candidate Protein Records
891
Pathway-Level Records
2303
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 259 11 POD (97) View species results
Terpenoid pathway 190 20 BAHD (58) View species results
Alkaloid pathway 161 19 PYKS (29) View species results
Flavonoid pathway 135 10 PAL (38) View species results
Rosmarinic acid pathway 95 7 PAL (38) View species results
Steroid pathway 51 12 CAS (20) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 897 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 126 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Aaltescaffold_20196080 Alkaloid NMT medium pass
Aaltescaffold_20204840 Alkaloid NMT low borderline
Aaltescaffold_20206360 Alkaloid NMT medium pass
Aaltescaffold_20209620 Alkaloid NMT medium borderline
Aaltescaffold_20217320 Alkaloid NMT medium pass
Aaltescaffold_20219190 Alkaloid NMT medium borderline
Aaltescaffold_20219210 Alkaloid NMT low borderline
Aaltescaffold_20220500 Alkaloid NMT low borderline
Aaltescaffold_20223770 Alkaloid NMT low borderline
Aaltescaffold_20225290 Alkaloid NMT medium pass
Aaltescaffold_20231420 Alkaloid NMT low borderline
Aaltescaffold_30254020 Alkaloid NMT low borderline
Aaltescaffold_30290810 Alkaloid NMT medium borderline
Aaltescaffold_30307510 Alkaloid NMT medium pass
Aaltescaffold_30307520 Alkaloid NMT medium pass
Aaltescaffold_40329430 Alkaloid NMT low borderline
Aaltescaffold_40331680 Alkaloid NMT medium borderline
Aaltescaffold_40342630 Alkaloid NMT low borderline
Aaltescaffold_50390730 Alkaloid NMT low borderline
Aaltescaffold_50391160 Alkaloid NMT low borderline
Aaltescaffold_50392170 Alkaloid NMT low borderline
Aaltescaffold_50392820 Alkaloid NMT medium pass
Aaltescaffold_60411980 Alkaloid NMT low borderline
Aaltescaffold_60412710 Alkaloid NMT medium borderline
Aaltescaffold_60412720 Alkaloid NMT medium borderline
Aaltescaffold_60412730 Alkaloid NMT low borderline
Aaltescaffold_60412960 Alkaloid NMT low borderline
Aaltescaffold_60424720 Alkaloid NMT medium pass
Aaltescaffold_60424930 Alkaloid NMT medium pass
Aaltescaffold_60428040 Alkaloid NMT low borderline
Aaltescaffold_60433340 Alkaloid NMT low borderline
Aaltescaffold_60434240 Alkaloid NMT medium borderline
Aaltescaffold_60437790 Alkaloid NMT medium pass
Aaltescaffold_70441630 Alkaloid NMT medium pass
Aaltescaffold_70446060 Alkaloid NMT medium pass
Aaltescaffold_70446530 Alkaloid NMT low borderline
Aaltescaffold_70446640 Alkaloid NMT low borderline
Aaltescaffold_80473350 Alkaloid NMT medium pass
Aaltescaffold_80492620 Alkaloid NMT low borderline
Aaltescaffold_80494790 Alkaloid NMT medium borderline
Aaltescaffold_80498330 Alkaloid NMT low borderline
Aaltescaffold_80501160 Alkaloid NMT low borderline
Aaltescaffold_90512320 Alkaloid NMT low borderline
Aaltescaffold_90524820 Alkaloid NMT medium borderline
Aaltescaffold_90528300 Alkaloid NMT low borderline
Aaltescaffold_90528330 Alkaloid NMT medium pass
Aaltescaffold_90532550 Alkaloid NMT medium pass
Aaltescaffold_10036370 Alkaloid PMT low borderline
Aaltescaffold_20216820 Alkaloid PMT medium borderline
Aaltescaffold_20218170 Alkaloid PMT low borderline