PlantSME Plant secondary metabolism enzyme database

Bonia amplexicaulis (bonia_amplexicaulis)

Imported from atlas release summary for Bonia amplexicaulis.

2193
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 621 20 BAHD (247) View species results
Phenylpropanoid pathway 530 12 POD (270) View species results
Alkaloid pathway 443 24 7DLGT (85) View species results
Flavonoid pathway 283 12 UFGT (173) View species results
Rosmarinic acid pathway 196 7 C4H (82) View species results
Steroid pathway 120 13 SMT1/SMT2/SMT3 (51) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1655 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 469 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
BOampscaffold43390316180 Alkaloid 7DLGT low borderline
BOampscaffold4340318400 Alkaloid 7DLGT low borderline
BOampscaffold4340318410 Alkaloid 7DLGT low borderline
BOampscaffold4340318420 Alkaloid 7DLGT low borderline
BOampscaffold4340318430 Alkaloid 7DLGT low borderline
BOampscaffold4360318720 Alkaloid 7DLGT low borderline
BOampscaffold43920319180 Alkaloid 7DLGT low borderline
BOampscaffold4440320850 Alkaloid 7DLGT medium pass
BOampscaffold4440320860 Alkaloid 7DLGT low borderline
BOampscaffold450323760 Alkaloid 7DLGT low borderline
BOampscaffold460331940 Alkaloid 7DLGT medium pass
BOampscaffold460332850 Alkaloid 7DLGT low borderline
BOampscaffold460332860 Alkaloid 7DLGT low borderline
BOampscaffold460332870 Alkaloid 7DLGT medium pass
BOampscaffold46300341760 Alkaloid 7DLGT medium pass
BOampscaffold46300341780 Alkaloid 7DLGT medium pass
BOampscaffold470344470 Alkaloid 7DLGT medium pass
BOampscaffold470345600 Alkaloid 7DLGT low borderline
BOampscaffold470345610 Alkaloid 7DLGT medium pass
BOampscaffold470345620 Alkaloid 7DLGT medium pass
BOampscaffold470348390 Alkaloid 7DLGT low borderline
BOampscaffold4940354250 Alkaloid 7DLGT low borderline
BOampscaffold5000364770 Alkaloid 7DLGT low borderline
BOampscaffold5000364780 Alkaloid 7DLGT low borderline
BOampscaffold5000364790 Alkaloid 7DLGT low borderline
BOampscaffold5000364890 Alkaloid 7DLGT low borderline
BOampscaffold5000365660 Alkaloid 7DLGT medium pass
BOampscaffold50359190 Alkaloid 7DLGT medium pass
BOampscaffold50362670 Alkaloid 7DLGT low borderline
BOampscaffold530370520 Alkaloid 7DLGT low borderline
BOampscaffold530370540 Alkaloid 7DLGT low borderline
BOampscaffold530373080 Alkaloid 7DLGT low borderline
BOampscaffold530373090 Alkaloid 7DLGT medium pass
BOampscaffold530373100 Alkaloid 7DLGT low borderline
BOampscaffold530373110 Alkaloid 7DLGT low borderline
BOampscaffold530374060 Alkaloid 7DLGT medium pass
BOampscaffold560378940 Alkaloid 7DLGT low borderline
BOampscaffold5610380600 Alkaloid 7DLGT low borderline
BOampscaffold5610380610 Alkaloid 7DLGT low borderline
BOampscaffold5800383960 Alkaloid 7DLGT medium pass
BOampscaffold5800383970 Alkaloid 7DLGT high pass
BOampscaffold6190388510 Alkaloid 7DLGT low borderline
BOampscaffold6190388520 Alkaloid 7DLGT low borderline
BOampscaffold6190388530 Alkaloid 7DLGT low borderline
BOampscaffold62550389550 Alkaloid 7DLGT low borderline
BOampscaffold6820397410 Alkaloid 7DLGT medium pass
BOampscaffold6860397660 Alkaloid 7DLGT high pass
BOampscaffold7090400540 Alkaloid 7DLGT low borderline
BOampscaffold7380402950 Alkaloid 7DLGT low borderline
BOampscaffold780414500 Alkaloid 7DLGT high pass