PlantSME Plant secondary metabolism enzyme database

Bonia amplexicaulis (bonia_amplexicaulis)

Imported from atlas release summary for Bonia amplexicaulis.

2193
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 621 20 BAHD (247) View species results
Phenylpropanoid pathway 530 12 POD (270) View species results
Alkaloid pathway 443 24 7DLGT (85) View species results
Flavonoid pathway 283 12 UFGT (173) View species results
Rosmarinic acid pathway 196 7 C4H (82) View species results
Steroid pathway 120 13 SMT1/SMT2/SMT3 (51) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1655 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 469 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
BOampscaffold780414510 Alkaloid 7DLGT high pass
BOampscaffold810422750 Alkaloid 7DLGT low borderline
BOampscaffold810423570 Alkaloid 7DLGT low borderline
BOampscaffold8170426170 Alkaloid 7DLGT high pass
BOampscaffold8470430530 Alkaloid 7DLGT high pass
BOampscaffold8710435630 Alkaloid 7DLGT low borderline
BOampscaffold8890440170 Alkaloid 7DLGT low borderline
BOampscaffold9080444590 Alkaloid 7DLGT low borderline
BOampscaffold9080444610 Alkaloid 7DLGT low borderline
BOampscaffold9080446430 Alkaloid 7DLGT medium pass
BOampscaffold9080446440 Alkaloid 7DLGT medium pass
BOampscaffold9080448350 Alkaloid 7DLGT low borderline
BOampscaffold9080448360 Alkaloid 7DLGT low borderline
BOampscaffold9160451100 Alkaloid 7DLGT low borderline
BOampscaffold9160453480 Alkaloid 7DLGT low borderline
BOampscaffold9250455500 Alkaloid 7DLGT medium pass
BOampscaffold9250455510 Alkaloid 7DLGT medium pass
BOampscaffold930460230 Alkaloid 7DLGT high pass
BOampscaffold930460240 Alkaloid 7DLGT medium pass
BOampscaffold9800468130 Alkaloid 7DLGT high pass
BOampscaffold9870468560 Alkaloid 7DLGT low borderline
BOampscaffold9870468570 Alkaloid 7DLGT low borderline
BOampC109336570007900 Alkaloid 7DLH medium borderline
BOampC110451690011710 Alkaloid 7DLH medium pass
BOampC110605270012130 Alkaloid 7DLH medium borderline
BOampC110605270012140 Alkaloid 7DLH medium borderline
BOampscaffold149580090300 Alkaloid 7DLH low borderline
BOampscaffold15940099530 Alkaloid 7DLH low borderline
BOampscaffold1610107150 Alkaloid 7DLH medium borderline
BOampscaffold1610110460 Alkaloid 7DLH medium borderline
BOampscaffold1790135750 Alkaloid 7DLH medium borderline
BOampscaffold2440198470 Alkaloid 7DLH medium borderline
BOampscaffold2440198490 Alkaloid 7DLH medium borderline
BOampscaffold2440198510 Alkaloid 7DLH medium borderline
BOampscaffold2440198560 Alkaloid 7DLH medium pass
BOampscaffold3230263260 Alkaloid 7DLH medium borderline
BOampscaffold4280312400 Alkaloid 7DLH low borderline
BOampscaffold4290315520 Alkaloid 7DLH medium borderline
BOampscaffold4290315550 Alkaloid 7DLH medium borderline
BOampscaffold8100423820 Alkaloid 7DLH medium borderline
BOampscaffold900440890 Alkaloid 7DLH low borderline
BOampC108606330004950 Alkaloid 8HGO medium pass
BOampscaffold10890037110 Alkaloid 8HGO medium borderline
BOampscaffold10890037120 Alkaloid 8HGO low borderline
BOampscaffold13830075570 Alkaloid 8HGO medium borderline
BOampscaffold13830075580 Alkaloid 8HGO medium pass
BOampscaffold1610108260 Alkaloid 8HGO medium borderline
BOampscaffold1980147850 Alkaloid 8HGO low borderline
BOampscaffold20520162530 Alkaloid 8HGO low borderline
BOampscaffold2090165660 Alkaloid 8HGO low borderline