PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3885
Candidate Protein Records
3404
Pathway-Level Records
8036
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
BhybBhD10069830.1 Rosmarinic Acid C4H low borderline
BhybBhD10077470.1 Rosmarinic Acid C4H low borderline
BhybBhD10077490.1 Rosmarinic Acid C4H medium pass
BhybBhD10084770.1 Rosmarinic Acid C4H low borderline
BhybBhD10087180.1 Rosmarinic Acid C4H low borderline
BhybBhD10087180.2 Rosmarinic Acid C4H low borderline
BhybBhD10093530.1 Rosmarinic Acid C4H low borderline
BhybBhD10094890.1 Rosmarinic Acid C4H low borderline
BhybBhD10100700.1 Rosmarinic Acid C4H low borderline
BhybBhD10102680.1 Rosmarinic Acid C4H low borderline
BhybBhD10103700.1 Rosmarinic Acid C4H low borderline
BhybBhD10103710.1 Rosmarinic Acid C4H low borderline
BhybBhD10105670.1 Rosmarinic Acid C4H low borderline
BhybBhD10105810.1 Rosmarinic Acid C4H low borderline
BhybBhD20113390.2 Rosmarinic Acid C4H low borderline
BhybBhD20114270.1 Rosmarinic Acid C4H low borderline
BhybBhD20115170.1 Rosmarinic Acid C4H low borderline
BhybBhD20116110.1 Rosmarinic Acid C4H low borderline
BhybBhD20117250.1 Rosmarinic Acid C4H medium pass
BhybBhD20117270.1 Rosmarinic Acid C4H medium pass
BhybBhD20117290.1 Rosmarinic Acid C4H medium pass
BhybBhD20121170.1 Rosmarinic Acid C4H medium pass
BhybBhD20123470.1 Rosmarinic Acid C4H low borderline
BhybBhD20134690.1 Rosmarinic Acid C4H medium pass
BhybBhD20136480.1 Rosmarinic Acid C4H medium pass
BhybBhD20137090.1 Rosmarinic Acid C4H low borderline
BhybBhD20137290.1 Rosmarinic Acid C4H low borderline
BhybBhD20141400.1 Rosmarinic Acid C4H low borderline
BhybBhD20141420.1 Rosmarinic Acid C4H medium pass
BhybBhD20142770.1 Rosmarinic Acid C4H low borderline
BhybBhD20142780.1 Rosmarinic Acid C4H low borderline
BhybBhD20144250.1 Rosmarinic Acid C4H medium pass
BhybBhD20145990.1 Rosmarinic Acid C4H medium pass
BhybBhD20148480.1 Rosmarinic Acid C4H medium pass
BhybBhD20150220.1 Rosmarinic Acid C4H low borderline
BhybBhD20151050.1 Rosmarinic Acid C4H low borderline
BhybBhD20161730.1 Rosmarinic Acid C4H low borderline
BhybBhD20162700.1 Rosmarinic Acid C4H medium pass
BhybBhD20164190.1 Rosmarinic Acid C4H low borderline
BhybBhD20166090.1 Rosmarinic Acid C4H low borderline
BhybBhD20166090.2 Rosmarinic Acid C4H low borderline
BhybBhD20166100.1 Rosmarinic Acid C4H low borderline
BhybBhD20166120.1 Rosmarinic Acid C4H low borderline
BhybBhD20166130.1 Rosmarinic Acid C4H low borderline
BhybBhD20166140.1 Rosmarinic Acid C4H low borderline
BhybBhD20166160.1 Rosmarinic Acid C4H low borderline
BhybBhD20166170.1 Rosmarinic Acid C4H low borderline
BhybBhD20166180.1 Rosmarinic Acid C4H low borderline
BhybBhD20166200.1 Rosmarinic Acid C4H low borderline
BhybBhD20166370.1 Rosmarinic Acid C4H low borderline