PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3885
Candidate Protein Records
3404
Pathway-Level Records
8036
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
BhybBhS30519310.2 Steroid CYP90D1 low borderline
BhybBhS50588240.1 Steroid CYP90D1 medium borderline
BhybBhS60594030.1 Steroid CYP90D1 low borderline
BhybBhS60602330.1 Steroid CYP90D1 medium borderline
BhybBhS70635600.1 Steroid CYP90D1 low borderline
BhybBhS70636590.1 Steroid CYP90D1 low borderline
BhybBhS80653690.1 Steroid CYP90D1 low borderline
BhybBhS90674180.1 Steroid CYP90D1 low borderline
BhybBhS90683810.3 Steroid CYP90D1 medium borderline
BhybBhS90690430.1 Steroid CYP90D1 medium borderline
BhybBhD20111600.1 Steroid DET2 low borderline
BhybBhD20180590.1 Steroid DET2 medium pass
BhybBhS10386410.1 Steroid DET2 medium pass
BhybBhS10417110.1 Steroid DET2 low borderline
BhybBhS40545500.1 Steroid DET2 low borderline
BhybBhS60599500.1 Steroid DET2 low borderline
BhybBhD10027500.1 Steroid DWF1 low borderline
BhybBhD10038780.1 Steroid DWF1 medium pass
BhybBhD30195230.1 Steroid DWF1 medium pass
BhybBhS40554070.1 Steroid DWF1 medium pass
BhybBhS70644490.1 Steroid DWF1 medium pass
BhybBhD10002870.1 Steroid DWF4/CYP90B1 medium borderline
BhybBhD10007300.1 Steroid DWF4/CYP90B1 medium borderline
BhybBhD10008230.1 Steroid DWF4/CYP90B1 low borderline
BhybBhD10008240.1 Steroid DWF4/CYP90B1 low borderline
BhybBhD10008250.1 Steroid DWF4/CYP90B1 low borderline
BhybBhD10009940.1 Steroid DWF4/CYP90B1 low borderline
BhybBhD10019580.1 Steroid DWF4/CYP90B1 low borderline
BhybBhD10020000.1 Steroid DWF4/CYP90B1 low borderline
BhybBhD10022120.1 Steroid DWF4/CYP90B1 low borderline
BhybBhD10026190.1 Steroid DWF4/CYP90B1 low borderline
BhybBhD10028950.1 Steroid DWF4/CYP90B1 low borderline
BhybBhD10032410.1 Steroid DWF4/CYP90B1 low borderline
BhybBhD10036740.1 Steroid DWF4/CYP90B1 low borderline
BhybBhD10039940.1 Steroid DWF4/CYP90B1 low borderline
BhybBhD10043780.1 Steroid DWF4/CYP90B1 low borderline
BhybBhD10049780.1 Steroid DWF4/CYP90B1 medium borderline
BhybBhD10050860.1 Steroid DWF4/CYP90B1 low borderline
BhybBhD10050860.2 Steroid DWF4/CYP90B1 low borderline
BhybBhD10050860.3 Steroid DWF4/CYP90B1 low borderline
BhybBhD10050860.4 Steroid DWF4/CYP90B1 low borderline
BhybBhD10050870.1 Steroid DWF4/CYP90B1 low borderline
BhybBhD10050920.1 Steroid DWF4/CYP90B1 low borderline
BhybBhD10084530.1 Steroid DWF4/CYP90B1 low borderline
BhybBhD10084560.1 Steroid DWF4/CYP90B1 low borderline
BhybBhD10084570.1 Steroid DWF4/CYP90B1 low borderline
BhybBhD10094890.1 Steroid DWF4/CYP90B1 medium borderline
BhybBhD10103220.1 Steroid DWF4/CYP90B1 low borderline
BhybBhD10103240.1 Steroid DWF4/CYP90B1 low borderline
BhybBhD10103250.1 Steroid DWF4/CYP90B1 low borderline