PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3885
Candidate Protein Records
3404
Pathway-Level Records
8036
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
BhybBhD30268220.1 Steroid DWF4/CYP90B1 low borderline
BhybBhD40279310.1 Steroid DWF4/CYP90B1 low borderline
BhybBhD40279410.1 Steroid DWF4/CYP90B1 low borderline
BhybBhD40279420.1 Steroid DWF4/CYP90B1 low borderline
BhybBhD40281500.1 Steroid DWF4/CYP90B1 medium borderline
BhybBhD40285100.1 Steroid DWF4/CYP90B1 low borderline
BhybBhD40287480.2 Steroid DWF4/CYP90B1 medium borderline
BhybBhD40298950.1 Steroid DWF4/CYP90B1 low borderline
BhybBhD40312330.1 Steroid DWF4/CYP90B1 medium borderline
BhybBhD40313230.1 Steroid DWF4/CYP90B1 low borderline
BhybBhD40318310.1 Steroid DWF4/CYP90B1 low borderline
BhybBhD40326720.1 Steroid DWF4/CYP90B1 low borderline
BhybBhD40331390.1 Steroid DWF4/CYP90B1 low borderline
BhybBhD40334650.1 Steroid DWF4/CYP90B1 low borderline
BhybBhD40335970.1 Steroid DWF4/CYP90B1 low borderline
BhybBhD40335980.1 Steroid DWF4/CYP90B1 low borderline
BhybBhD40338340.1 Steroid DWF4/CYP90B1 medium borderline
BhybBhD40338340.2 Steroid DWF4/CYP90B1 medium borderline
BhybBhD50351420.1 Steroid DWF4/CYP90B1 medium borderline
BhybBhD50368620.1 Steroid DWF4/CYP90B1 medium borderline
BhybBhD50368630.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS100425710.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS100425810.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS100431330.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS100435930.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS10386000.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS10389350.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS10389360.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS10389370.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS10399190.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS10399270.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS10399280.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS10399290.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS10399300.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS10399450.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS10399460.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS10399460.2 Steroid DWF4/CYP90B1 low borderline
BhybBhS10399460.3 Steroid DWF4/CYP90B1 low borderline
BhybBhS10399470.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS10399500.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS10399510.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS10399520.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS10399550.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS10399550.10 Steroid DWF4/CYP90B1 low borderline
BhybBhS10399550.11 Steroid DWF4/CYP90B1 low borderline
BhybBhS10399550.12 Steroid DWF4/CYP90B1 low borderline
BhybBhS10399550.13 Steroid DWF4/CYP90B1 low borderline
BhybBhS10399550.2 Steroid DWF4/CYP90B1 low borderline
BhybBhS10399550.3 Steroid DWF4/CYP90B1 low borderline
BhybBhS10399550.4 Steroid DWF4/CYP90B1 low borderline