PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3885
Candidate Protein Records
3404
Pathway-Level Records
8036
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
BhybBhD10020000.1 Alkaloid T3O medium borderline
BhybBhD10022680.1 Alkaloid T3O medium pass
BhybBhD10028950.1 Alkaloid T3O medium borderline
BhybBhD10028980.1 Alkaloid T3O medium borderline
BhybBhD10032410.1 Alkaloid T3O medium borderline
BhybBhD10034000.1 Alkaloid T3O medium pass
BhybBhD10037800.1 Alkaloid T3O medium borderline
BhybBhD10040580.1 Alkaloid T3O medium pass
BhybBhD10048490.1 Alkaloid T3O medium borderline
BhybBhD10049750.1 Alkaloid T3O medium borderline
BhybBhD10051180.1 Alkaloid T3O medium pass
BhybBhD10069830.1 Alkaloid T3O medium pass
BhybBhD10074680.1 Alkaloid T3O medium pass
BhybBhD10077490.1 Alkaloid T3O medium borderline
BhybBhD10081830.1 Alkaloid T3O medium pass
BhybBhD10093530.1 Alkaloid T3O medium borderline
BhybBhD10100700.1 Alkaloid T3O low borderline
BhybBhD10103220.1 Alkaloid T3O low borderline
BhybBhD10103240.1 Alkaloid T3O low borderline
BhybBhD10103250.1 Alkaloid T3O low borderline
BhybBhD10105670.1 Alkaloid T3O medium borderline
BhybBhD10105810.1 Alkaloid T3O medium borderline
BhybBhD20114270.1 Alkaloid T3O medium pass
BhybBhD20115170.1 Alkaloid T3O medium pass
BhybBhD20116110.1 Alkaloid T3O low borderline
BhybBhD20117250.1 Alkaloid T3O medium borderline
BhybBhD20117270.1 Alkaloid T3O medium borderline
BhybBhD20117290.1 Alkaloid T3O medium borderline
BhybBhD20121170.1 Alkaloid T3O medium borderline
BhybBhD20136480.1 Alkaloid T3O medium borderline
BhybBhD20137090.1 Alkaloid T3O medium borderline
BhybBhD20140180.1 Alkaloid T3O medium pass
BhybBhD20141420.1 Alkaloid T3O medium borderline
BhybBhD20142000.1 Alkaloid T3O medium pass
BhybBhD20142020.1 Alkaloid T3O medium pass
BhybBhD20144250.1 Alkaloid T3O medium borderline
BhybBhD20144630.1 Alkaloid T3O medium pass
BhybBhD20145990.1 Alkaloid T3O medium borderline
BhybBhD20150220.1 Alkaloid T3O medium pass
BhybBhD20177370.1 Alkaloid T3O low borderline
BhybBhD20177380.1 Alkaloid T3O medium pass
BhybBhD20177390.1 Alkaloid T3O medium pass
BhybBhD20180800.1 Alkaloid T3O low borderline
BhybBhD20181070.1 Alkaloid T3O low borderline
BhybBhD20188480.1 Alkaloid T3O low borderline
BhybBhD30196000.1 Alkaloid T3O high pass
BhybBhD30197260.1 Alkaloid T3O medium borderline
BhybBhD30199390.1 Alkaloid T3O medium borderline
BhybBhD30199510.1 Alkaloid T3O medium borderline
BhybBhD30199530.1 Alkaloid T3O medium borderline