PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3885
Candidate Protein Records
3404
Pathway-Level Records
8036
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
BhybBhD30211400.1 Alkaloid TYDC_DDC medium borderline
BhybBhD30211440.1 Alkaloid TYDC_DDC medium borderline
BhybBhD50369110.1 Alkaloid TYDC_DDC medium borderline
BhybBhS10391200.1 Alkaloid TYDC_DDC medium borderline
BhybBhS10391260.1 Alkaloid TYDC_DDC medium borderline
BhybBhS10418240.1 Alkaloid TYDC_DDC medium borderline
BhybBhS10418250.1 Alkaloid TYDC_DDC medium borderline
BhybBhS30490790.1 Alkaloid TYDC_DDC medium borderline
BhybBhS30490800.1 Alkaloid TYDC_DDC medium borderline
BhybBhS30490810.1 Alkaloid TYDC_DDC medium borderline
BhybBhS30490820.1 Alkaloid TYDC_DDC medium borderline
BhybBhS30490830.1 Alkaloid TYDC_DDC medium borderline
BhybBhS40548600.1 Alkaloid TYDC_DDC medium borderline
BhybBhS60608210.1 Alkaloid TYDC_DDC medium borderline
BhybBhD30191200.1 Alkaloid XMT_MXMT_DXMT low borderline
BhybBhD40298150.1 Alkaloid XMT_MXMT_DXMT medium borderline
BhybBhS40551280.1 Alkaloid XMT_MXMT_DXMT medium borderline
BhybBhS40557550.1 Alkaloid XMT_MXMT_DXMT low borderline
BhybBhD10001800.1 Flavonoid 4CL low borderline
BhybBhD10001800.2 Flavonoid 4CL low borderline
BhybBhD10041410.1 Flavonoid 4CL medium pass
BhybBhD10045940.1 Flavonoid 4CL low borderline
BhybBhD10065320.1 Flavonoid 4CL low borderline
BhybBhD10088810.1 Flavonoid 4CL medium pass
BhybBhD10088810.2 Flavonoid 4CL medium pass
BhybBhD10088820.1 Flavonoid 4CL medium pass
BhybBhD10102060.1 Flavonoid 4CL medium pass
BhybBhD10103740.1 Flavonoid 4CL medium pass
BhybBhD10103750.1 Flavonoid 4CL medium pass
BhybBhD10103760.1 Flavonoid 4CL medium pass
BhybBhD10103770.1 Flavonoid 4CL medium pass
BhybBhD10103870.1 Flavonoid 4CL medium pass
BhybBhD10104130.1 Flavonoid 4CL medium pass
BhybBhD20158230.1 Flavonoid 4CL low borderline
BhybBhD20158230.2 Flavonoid 4CL low borderline
BhybBhD20167350.1 Flavonoid 4CL medium pass
BhybBhD20167790.1 Flavonoid 4CL low borderline
BhybBhD20174620.1 Flavonoid 4CL low borderline
BhybBhD20184240.1 Flavonoid 4CL medium pass
BhybBhD30193090.1 Flavonoid 4CL medium pass
BhybBhD30195710.1 Flavonoid 4CL low borderline
BhybBhD30198710.1 Flavonoid 4CL medium pass
BhybBhD30210850.1 Flavonoid 4CL low borderline
BhybBhD30218440.1 Flavonoid 4CL medium pass
BhybBhD30237980.1 Flavonoid 4CL medium pass
BhybBhD30237980.2 Flavonoid 4CL medium pass
BhybBhD30241980.1 Flavonoid 4CL medium pass
BhybBhD30252860.1 Flavonoid 4CL low borderline
BhybBhD30263410.1 Flavonoid 4CL medium pass
BhybBhD40287170.1 Flavonoid 4CL low borderline