PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3885
Candidate Protein Records
3404
Pathway-Level Records
8036
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
BhybBhS40542660.1 Flavonoid C4H medium borderline
BhybBhS40544010.1 Flavonoid C4H low borderline
BhybBhS70634490.1 Flavonoid C4H medium borderline
BhybBhS70635150.1 Flavonoid C4H low borderline
BhybBhS90679200.1 Flavonoid C4H medium borderline
BhybBhD10004380.1 Flavonoid CHI medium pass
BhybBhD40280770.2 Flavonoid CHI low borderline
BhybBhD40338490.1 Flavonoid CHI medium pass
BhybBhS100427200.1 Flavonoid CHI low borderline
BhybBhS20482750.1 Flavonoid CHI medium pass
BhybBhS50589550.1 Flavonoid CHI medium pass
BhybBhD10016430.1 Flavonoid CHS medium pass
BhybBhD10033750.1 Flavonoid CHS medium pass
BhybBhD10058090.1 Flavonoid CHS low borderline
BhybBhD10064400.1 Flavonoid CHS medium pass
BhybBhD10064430.1 Flavonoid CHS medium pass
BhybBhD10068200.1 Flavonoid CHS medium pass
BhybBhD10070870.1 Flavonoid CHS medium pass
BhybBhD30230640.1 Flavonoid CHS medium pass
BhybBhD40300160.1 Flavonoid CHS medium pass
BhybBhD40307600.1 Flavonoid CHS low borderline
BhybBhD40310660.1 Flavonoid CHS medium pass
BhybBhD40315360.1 Flavonoid CHS medium pass
BhybBhD40315400.1 Flavonoid CHS medium pass
BhybBhD40315470.1 Flavonoid CHS medium pass
BhybBhS100435080.1 Flavonoid CHS medium pass
BhybBhS20471840.1 Flavonoid CHS medium pass
BhybBhS30504030.1 Flavonoid CHS medium pass
BhybBhS40536290.1 Flavonoid CHS medium pass
BhybBhS40539570.1 Flavonoid CHS medium pass
BhybBhS50562330.1 Flavonoid CHS low borderline
BhybBhS50562500.1 Flavonoid CHS low borderline
BhybBhS50568810.1 Flavonoid CHS medium pass
BhybBhS60602080.1 Flavonoid CHS medium pass
BhybBhS60607660.1 Flavonoid CHS medium pass
BhybBhS70619800.1 Flavonoid CHS medium pass
BhybBhS70622860.1 Flavonoid CHS medium pass
BhybBhS70628070.1 Flavonoid CHS low borderline
BhybBhD10048120.1 Flavonoid DFR medium borderline
BhybBhD10048130.1 Flavonoid DFR medium borderline
BhybBhD20123070.1 Flavonoid DFR medium borderline
BhybBhD20126040.1 Flavonoid DFR medium borderline
BhybBhD20178930.1 Flavonoid DFR medium borderline
BhybBhD30199110.1 Flavonoid DFR medium borderline
BhybBhD30246280.1 Flavonoid DFR medium borderline
BhybBhD30266880.1 Flavonoid DFR medium borderline
BhybBhD30266880.2 Flavonoid DFR medium pass
BhybBhD30266900.1 Flavonoid DFR medium pass
BhybBhD30266910.1 Flavonoid DFR medium borderline
BhybBhD30266910.2 Flavonoid DFR medium borderline