PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3885
Candidate Protein Records
3404
Pathway-Level Records
8036
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
BhybBhS30505690.1 Flavonoid FNS medium borderline
BhybBhS30518360.1 Flavonoid FNS medium borderline
BhybBhS40551440.1 Flavonoid FNS medium borderline
BhybBhS40556680.1 Flavonoid FNS low borderline
BhybBhS50558870.1 Flavonoid FNS medium borderline
BhybBhS50569860.1 Flavonoid FNS low borderline
BhybBhS60599970.1 Flavonoid FNS low borderline
BhybBhS70634160.1 Flavonoid FNS medium borderline
BhybBhS70634470.1 Flavonoid FNS medium borderline
BhybBhS80657560.1 Flavonoid FNS medium borderline
BhybBhS80657590.1 Flavonoid FNS medium borderline
BhybBhS80658140.1 Flavonoid FNS medium borderline
BhybBhS80664930.1 Flavonoid FNS medium borderline
BhybBhS90693390.1 Flavonoid FNS medium borderline
BhybBhD10004100.1 Flavonoid IFR low borderline
BhybBhD10046320.1 Flavonoid IFR low borderline
BhybBhD10085600.1 Flavonoid IFR low borderline
BhybBhD10085870.1 Flavonoid IFR medium pass
BhybBhD10090820.1 Flavonoid IFR low borderline
BhybBhD10092760.1 Flavonoid IFR high pass
BhybBhD10099150.1 Flavonoid IFR medium borderline
BhybBhD20118170.1 Flavonoid IFR medium pass
BhybBhD20118180.1 Flavonoid IFR high pass
BhybBhD20118210.1 Flavonoid IFR high pass
BhybBhD20124000.1 Flavonoid IFR low borderline
BhybBhD20126950.1 Flavonoid IFR low borderline
BhybBhD20146160.1 Flavonoid IFR low borderline
BhybBhD20159160.1 Flavonoid IFR low borderline
BhybBhD20179610.1 Flavonoid IFR low borderline
BhybBhD30203560.1 Flavonoid IFR low borderline
BhybBhD30226910.1 Flavonoid IFR low borderline
BhybBhD30249520.1 Flavonoid IFR medium pass
BhybBhD30263950.1 Flavonoid IFR high pass
BhybBhD30267380.1 Flavonoid IFR low borderline
BhybBhD30267380.2 Flavonoid IFR low borderline
BhybBhD30274560.1 Flavonoid IFR low borderline
BhybBhD40282250.1 Flavonoid IFR high pass
BhybBhD40282260.1 Flavonoid IFR high pass
BhybBhD40286080.1 Flavonoid IFR low borderline
BhybBhD40286810.1 Flavonoid IFR low borderline
BhybBhD40301750.1 Flavonoid IFR low borderline
BhybBhD40323950.1 Flavonoid IFR low borderline
BhybBhD40326520.1 Flavonoid IFR low borderline
BhybBhD40331440.1 Flavonoid IFR high pass
BhybBhD40331450.1 Flavonoid IFR low borderline
BhybBhD40331460.1 Flavonoid IFR medium pass
BhybBhD50350820.1 Flavonoid IFR low borderline
BhybBhD50350820.2 Flavonoid IFR low borderline
BhybBhD50369700.1 Flavonoid IFR low borderline
BhybBhS100428540.1 Flavonoid IFR high pass