PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3885
Candidate Protein Records
3404
Pathway-Level Records
8036
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
BhybBhD50374650.1 Phenylpropanoid 4CL medium pass
BhybBhD50375570.1 Phenylpropanoid 4CL medium pass
BhybBhS100433050.1 Phenylpropanoid 4CL low borderline
BhybBhS100436350.1 Phenylpropanoid 4CL low borderline
BhybBhS10383140.1 Phenylpropanoid 4CL medium pass
BhybBhS10391890.1 Phenylpropanoid 4CL low borderline
BhybBhS10398020.1 Phenylpropanoid 4CL low borderline
BhybBhS10398420.1 Phenylpropanoid 4CL medium pass
BhybBhS20447120.1 Phenylpropanoid 4CL medium pass
BhybBhS20447360.1 Phenylpropanoid 4CL medium pass
BhybBhS20447480.1 Phenylpropanoid 4CL medium pass
BhybBhS20447490.1 Phenylpropanoid 4CL medium pass
BhybBhS20447500.1 Phenylpropanoid 4CL medium pass
BhybBhS20447510.1 Phenylpropanoid 4CL medium pass
BhybBhS20449000.1 Phenylpropanoid 4CL medium pass
BhybBhS20460370.1 Phenylpropanoid 4CL medium pass
BhybBhS20460410.1 Phenylpropanoid 4CL medium pass
BhybBhS20485050.1 Phenylpropanoid 4CL low borderline
BhybBhS30491200.1 Phenylpropanoid 4CL low borderline
BhybBhS30491200.2 Phenylpropanoid 4CL low borderline
BhybBhS30510090.1 Phenylpropanoid 4CL medium pass
BhybBhS30510800.1 Phenylpropanoid 4CL medium pass
BhybBhS30513450.1 Phenylpropanoid 4CL medium pass
BhybBhS30513450.2 Phenylpropanoid 4CL medium pass
BhybBhS40530920.1 Phenylpropanoid 4CL medium pass
BhybBhS40540660.1 Phenylpropanoid 4CL low borderline
BhybBhS40551000.1 Phenylpropanoid 4CL medium pass
BhybBhS40556000.1 Phenylpropanoid 4CL medium pass
BhybBhS50558120.1 Phenylpropanoid 4CL low borderline
BhybBhS50560560.1 Phenylpropanoid 4CL low borderline
BhybBhS50560560.2 Phenylpropanoid 4CL low borderline
BhybBhS50560560.3 Phenylpropanoid 4CL low borderline
BhybBhS50566310.1 Phenylpropanoid 4CL medium pass
BhybBhS50566330.1 Phenylpropanoid 4CL medium pass
BhybBhS50570710.1 Phenylpropanoid 4CL low borderline
BhybBhS50580810.1 Phenylpropanoid 4CL medium pass
BhybBhS50585860.1 Phenylpropanoid 4CL low borderline
BhybBhS50587840.1 Phenylpropanoid 4CL low borderline
BhybBhS50588260.1 Phenylpropanoid 4CL low borderline
BhybBhS50589760.1 Phenylpropanoid 4CL low borderline
BhybBhS70622230.1 Phenylpropanoid 4CL low borderline
BhybBhS70642540.1 Phenylpropanoid 4CL medium pass
BhybBhS80670500.1 Phenylpropanoid 4CL low borderline
BhybBhS80670500.2 Phenylpropanoid 4CL low borderline
BhybBhS90678930.1 Phenylpropanoid 4CL low borderline
BhybBhS90698930.1 Phenylpropanoid 4CL medium pass
BhybBhS90699720.1 Phenylpropanoid 4CL medium pass
BhybBhS90701520.1 Phenylpropanoid 4CL medium pass
BhybBhD10002870.1 Phenylpropanoid C3'H/CYP98A low borderline
BhybBhD10003000.1 Phenylpropanoid C3'H/CYP98A medium borderline