PlantSME Plant secondary metabolism enzyme database

Brassica juncea (brassica_juncea)

Imported from atlas release summary for Brassica juncea.

3334
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1088 19 BAHD (493) View species results
Alkaloid pathway 695 23 NMT (133) View species results
Phenylpropanoid pathway 689 11 POD (300) View species results
Flavonoid pathway 411 14 UFGT (250) View species results
Rosmarinic acid pathway 257 7 C4H (88) View species results
Steroid pathway 194 12 SMT1/SMT2/SMT3 (76) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLGT
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Gene Pathway Family Confidence Status
BjunA04G0013450 Alkaloid 7DLGT high pass
BjunA04G0015960 Alkaloid 7DLGT medium pass
BjunA04G0018130 Alkaloid 7DLGT medium pass
BjunA04G0019410 Alkaloid 7DLGT low borderline
BjunA04G0019420 Alkaloid 7DLGT low borderline
BjunA04G0020620 Alkaloid 7DLGT medium pass
BjunA04G0020630 Alkaloid 7DLGT medium pass
BjunA05G0004030 Alkaloid 7DLGT low borderline
BjunA05G0004040 Alkaloid 7DLGT low borderline
BjunA05G0006930 Alkaloid 7DLGT low borderline
BjunA05G0006940 Alkaloid 7DLGT low borderline
BjunA05G0007070 Alkaloid 7DLGT low borderline
BjunA05G0007080 Alkaloid 7DLGT low borderline
BjunA05G0007090 Alkaloid 7DLGT medium pass
BjunA05G0007100 Alkaloid 7DLGT medium pass
BjunA05G0007140 Alkaloid 7DLGT medium pass
BjunA05G0009070 Alkaloid 7DLGT medium pass
BjunA05G0011410 Alkaloid 7DLGT low borderline
BjunA05G0012490 Alkaloid 7DLGT low borderline
BjunA05G0013220 Alkaloid 7DLGT low borderline
BjunA05G0018440 Alkaloid 7DLGT low borderline
BjunA05G0020090 Alkaloid 7DLGT medium pass
BjunA05G0020850 Alkaloid 7DLGT medium pass
BjunA05G0020900 Alkaloid 7DLGT low borderline
BjunA05G0020910 Alkaloid 7DLGT low borderline
BjunA05G0020930 Alkaloid 7DLGT low borderline
BjunA05G0020950 Alkaloid 7DLGT medium pass
BjunA05G0021070 Alkaloid 7DLGT low borderline
BjunA05G0024810 Alkaloid 7DLGT medium pass
BjunA05G0027620 Alkaloid 7DLGT low borderline
BjunA05G0032330 Alkaloid 7DLGT medium pass
BjunA06G0002070 Alkaloid 7DLGT low borderline
BjunA06G0002080 Alkaloid 7DLGT medium pass
BjunA06G0002990 Alkaloid 7DLGT low borderline
BjunA06G0015710 Alkaloid 7DLGT high pass
BjunA06G0015730 Alkaloid 7DLGT low borderline
BjunA06G0023480 Alkaloid 7DLGT medium pass
BjunA07G0001630 Alkaloid 7DLGT medium pass
BjunA07G0002940 Alkaloid 7DLGT low borderline
BjunA07G0003640 Alkaloid 7DLGT low borderline
BjunA07G0010640 Alkaloid 7DLGT medium pass
BjunA07G0010650 Alkaloid 7DLGT medium pass
BjunA08G0001900 Alkaloid 7DLGT low borderline
BjunA08G0001920 Alkaloid 7DLGT low borderline
BjunA08G0007640 Alkaloid 7DLGT medium pass
BjunA08G0007650 Alkaloid 7DLGT low borderline
BjunA08G0008320 Alkaloid 7DLGT low borderline
BjunA08G0011390 Alkaloid 7DLGT low borderline
BjunA08G0021070 Alkaloid 7DLGT low borderline
BjunA08G0026340 Alkaloid 7DLGT medium pass