PlantSME Plant secondary metabolism enzyme database

Brassica juncea (brassica_juncea)

Imported from atlas release summary for Brassica juncea.

3334
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1088 19 BAHD (493) View species results
Alkaloid pathway 695 23 NMT (133) View species results
Phenylpropanoid pathway 689 11 POD (300) View species results
Flavonoid pathway 411 14 UFGT (250) View species results
Rosmarinic acid pathway 257 7 C4H (88) View species results
Steroid pathway 194 12 SMT1/SMT2/SMT3 (76) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BBE
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Gene Pathway Family Confidence Status Best Target
BjunA01G0009820 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
BjunA01G0009830 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
BjunA01G0009860 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
BjunA01G0009870 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
BjunA01G0009890 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
BjunA01G0010070 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
BjunA03G0015190 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
BjunA03G0043030 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
BjunA03G0043040 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
BjunA04G0019790 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
BjunA05G0008180 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
BjunA05G0008190 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
BjunA05G0019040 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
BjunA05G0019070 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
BjunA05G0019080 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
BjunA05G0019110 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
BjunA06G0034790 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
BjunA06G0034830 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
BjunA06G0034840 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
BjunA06G0034850 Alkaloid BBE low borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
BjunA07G0007490 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
BjunA07G0007530 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
BjunA07G0007540 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
BjunA07G0007550 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
BjunA07G0015890 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
BjunA08G0004390 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
BjunA08G0004400 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
BjunA08G0004410 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
BjunA08G0004420 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
BjunA08G0004440 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
BjunA08G0009990 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
BjunA08G0019870 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
BjunA09G0026780 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
BjunA09G0026820 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
BjunA09G0026830 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
BjunA09G0026840 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
BjunA09G0026850 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
BjunA09G0030330 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
BjunA09G0030340 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
BjunA09G0034540 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
BjunA09G0050070 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
BjunB01G0009030 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
BjunB02G0020080 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
BjunB02G0022540 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
BjunB02G0036930 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
BjunB02G0036950 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
BjunB02G0036980 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
BjunB02G0036990 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
BjunB02G0037000 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
BjunB02G0041950 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH