PlantSME Plant secondary metabolism enzyme database

Brassica juncea (brassica_juncea)

Imported from atlas release summary for Brassica juncea.

3334
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1088 19 BAHD (493) View species results
Alkaloid pathway 695 23 NMT (133) View species results
Phenylpropanoid pathway 689 11 POD (300) View species results
Flavonoid pathway 411 14 UFGT (250) View species results
Rosmarinic acid pathway 257 7 C4H (88) View species results
Steroid pathway 194 12 SMT1/SMT2/SMT3 (76) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAD
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Gene Pathway Family Confidence Status Best Target
BjunA01G0000750 Phenylpropanoid CAD medium pass CAD__00011__sp_Q02971_CADH7_ARATH
BjunA01G0000760 Phenylpropanoid CAD medium pass CAD__00012__sp_Q02972_CADH8_ARATH
BjunA01G0003240 Phenylpropanoid CAD medium pass CAD__00008__sp_O49482_CADH5_ARATH
BjunA01G0016670 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
BjunA01G0027760 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
BjunA01G0031310 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
BjunA02G0011690 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
BjunA03G0021490 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
BjunA03G0022920 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
BjunA03G0024240 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
BjunA03G0046290 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
BjunA03G0050090 Phenylpropanoid CAD medium pass CAD__00008__sp_O49482_CADH5_ARATH
BjunA05G0018410 Phenylpropanoid CAD low borderline CAD__00011__sp_Q02971_CADH7_ARATH
BjunA05G0022570 Phenylpropanoid CAD medium pass CAD__00010__sp_P48523_CADH4_ARATH
BjunA06G0005050 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
BjunA06G0020710 Phenylpropanoid CAD low borderline CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
BjunA06G0029850 Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
BjunA06G0035100 Phenylpropanoid CAD low borderline CAD__00011__sp_Q02971_CADH7_ARATH
BjunA06G0035910 Phenylpropanoid CAD medium pass CAD__00009__sp_P42734_CADH9_ARATH
BjunA07G0020500 Phenylpropanoid CAD low borderline CAD__00011__sp_Q02971_CADH7_ARATH
BjunA07G0028110 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
BjunA07G0031080 Phenylpropanoid CAD low borderline CAD__00011__sp_Q02971_CADH7_ARATH
BjunA07G0031170 Phenylpropanoid CAD low borderline CAD__00011__sp_Q02971_CADH7_ARATH
BjunA07G0032720 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
BjunA08G0002040 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
BjunA08G0009930 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
BjunA08G0016410 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
BjunA08G0016620 Phenylpropanoid CAD medium pass CAD__00012__sp_Q02972_CADH8_ARATH
BjunA08G0016630 Phenylpropanoid CAD medium pass CAD__00011__sp_Q02971_CADH7_ARATH
BjunA09G0001240 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
BjunA09G0005960 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
BjunA09G0014040 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
BjunA09G0017330 Phenylpropanoid CAD low borderline CAD__00011__sp_Q02971_CADH7_ARATH
BjunA09G0017670 Phenylpropanoid CAD low borderline CAD__00011__sp_Q02971_CADH7_ARATH
BjunA09G0031430 Phenylpropanoid CAD low borderline CAD__00010__sp_P48523_CADH4_ARATH
BjunA09G0035320 Phenylpropanoid CAD low borderline CAD__00011__sp_Q02971_CADH7_ARATH
BjunA09G0044510 Phenylpropanoid CAD medium pass CAD__00017__sp_Q9SJ25_CADH2_ARATH
BjunA09G0051120 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
BjunB01G0001720 Phenylpropanoid CAD medium pass CAD__00011__sp_Q02971_CADH7_ARATH
BjunB01G0001730 Phenylpropanoid CAD medium pass CAD__00011__sp_Q02971_CADH7_ARATH
BjunB01G0001740 Phenylpropanoid CAD medium pass CAD__00012__sp_Q02972_CADH8_ARATH
BjunB01G0027220 Phenylpropanoid CAD medium pass CAD__00010__sp_P48523_CADH4_ARATH
BjunB02G0004270 Phenylpropanoid CAD low borderline CAD__00011__sp_Q02971_CADH7_ARATH
BjunB02G0004380 Phenylpropanoid CAD medium pass CAD__00017__sp_Q9SJ25_CADH2_ARATH
BjunB02G0007470 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
BjunB02G0036590 Phenylpropanoid CAD low borderline CAD__00011__sp_Q02971_CADH7_ARATH
BjunB02G0038550 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
BjunB02G0052080 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
BjunB02G0054330 Phenylpropanoid CAD medium pass CAD__00008__sp_O49482_CADH5_ARATH
BjunB02G0056730 Phenylpropanoid CAD medium pass CAD__00009__sp_P42734_CADH9_ARATH