PlantSME Plant secondary metabolism enzyme database

Brassica juncea (brassica_juncea)

Imported from atlas release summary for Brassica juncea.

3334
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1088 19 BAHD (493) View species results
Alkaloid pathway 695 23 NMT (133) View species results
Phenylpropanoid pathway 689 11 POD (300) View species results
Flavonoid pathway 411 14 UFGT (250) View species results
Rosmarinic acid pathway 257 7 C4H (88) View species results
Steroid pathway 194 12 SMT1/SMT2/SMT3 (76) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CSE
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Gene Pathway Family Confidence Status Best Target
BjunB07G0007950 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
BjunB07G0027460 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
BjunB07G0034830 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
BjunB08G0008830 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
BjunB08G0026420 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
BjunB08G0027090 Phenylpropanoid CSE low borderline CSE__00002__sp_Q9C942_CSE_ARATH
BjunB08G0035870 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
BjunB08G0035910 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
BjunB08G0035920 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
BjunB08G0043960 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
BjunB08G0046950 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
BjunContig16620011320 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
BjunContig20240015770 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
BjunContig668_1_4839870043820 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
BjunContig71_869334_18815850045770 Phenylpropanoid CSE low borderline CSE__00002__sp_Q9C942_CSE_ARATH
BjunContig97640053530 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
BjunSuper_scaffold_17_4873462_70975140060060 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
BjunSuper_scaffold_3_2169093_4702862_1_24202850065380 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
BjunSuper_scaffold_68_2107027_24590580069750 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL