PlantSME Plant secondary metabolism enzyme database

Brassica juncea (brassica_juncea)

Imported from atlas release summary for Brassica juncea.

3334
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1088 19 BAHD (493) View species results
Alkaloid pathway 695 23 NMT (133) View species results
Phenylpropanoid pathway 689 11 POD (300) View species results
Flavonoid pathway 411 14 UFGT (250) View species results
Rosmarinic acid pathway 257 7 C4H (88) View species results
Steroid pathway 194 12 SMT1/SMT2/SMT3 (76) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
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Gene Pathway Family Confidence Status Best Target
BjunB08G0014160 Terpenoid CYP76 low borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
BjunB08G0019880 Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
BjunB08G0021890 Terpenoid CYP76 low borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
BjunB08G0024240 Terpenoid CYP76 medium borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
BjunB08G0024840 Terpenoid CYP76 low borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
BjunB08G0025180 Terpenoid CYP76 low borderline CYP76__00025__sp_W8JIS5_IO_CATRO
BjunB08G0028790 Terpenoid CYP76 medium borderline CYP76__00008__sp_A0A1D8QMG4_C76K8_ROSOF
BjunB08G0030740 Terpenoid CYP76 medium pass CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
BjunB08G0035020 Terpenoid CYP76 medium pass CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
BjunB08G0035430 Terpenoid CYP76 low borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
BjunB08G0038580 Terpenoid CYP76 medium pass CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
BjunB08G0039310 Terpenoid CYP76 low borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
BjunContig12320005220 Terpenoid CYP76 medium pass CYP76__00023__sp_S4UX02_CYPH1_SALMI
BjunContig14300008600 Terpenoid CYP76 medium pass CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
BjunContig1514_505967_5960770009260 Terpenoid CYP76 medium pass CYP76__00002__sp_A0A0C5QRZ2_C76H2_SALFT
BjunContig184_1_1098370013970 Terpenoid CYP76 low borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
BjunContig197_1_5304640014670 Terpenoid CYP76 low borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
BjunContig23170018270 Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
BjunContig347_1_255857_209037_2558570026870 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
BjunContig36120027750 Terpenoid CYP76 medium pass CYP76__00008__sp_A0A1D8QMG4_C76K8_ROSOF
BjunContig3980031260 Terpenoid CYP76 medium pass CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
BjunContig406_1_1842380031620 Terpenoid CYP76 medium borderline CYP76__00024__sp_W0FKI0_DOX1_PERHD
BjunContig501_1525585_17300010036830 Terpenoid CYP76 low borderline CYP76__00008__sp_A0A1D8QMG4_C76K8_ROSOF
BjunContig50520038400 Terpenoid CYP76 low borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
BjunContig5330039350 Terpenoid CYP76 medium borderline CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
BjunContig668_1_4839870044250 Terpenoid CYP76 medium pass CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
BjunContig7050045070 Terpenoid CYP76 medium pass CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
BjunContig781_1492275_15331450048530 Terpenoid CYP76 low borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
BjunContig8310049470 Terpenoid CYP76 medium pass CYP76__00023__sp_S4UX02_CYPH1_SALMI
BjunContig9170052050 Terpenoid CYP76 low borderline CYP76__00018__sp_Q69X58_C76M7_ORYSJ
BjunSuper_scaffold_120_122617_7993060055500 Terpenoid CYP76 medium pass CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
BjunSuper_scaffold_120_122617_7993060055820 Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
BjunSuper_scaffold_182_2_9161900060300 Terpenoid CYP76 low borderline CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
BjunSuper_scaffold_28_1_2326914_1_4646450064350 Terpenoid CYP76 low borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
BjunSuper_scaffold_40_2508543_4711922_1153965_22033800065770 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
BjunSuper_scaffold_5_1_6334723_245229_7451470068440 Terpenoid CYP76 medium borderline CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
BjunSuper_scaffold_5_1_6334723_745148_63347230068620 Terpenoid CYP76 medium borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
BjunSuper_scaffold_5_1_6334723_745148_63347230068640 Terpenoid CYP76 medium borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
BjunSuper_scaffold_750071200 Terpenoid CYP76 low borderline CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
BjunSuper_scaffold_84_2683469_28976790074190 Terpenoid CYP76 low borderline CYP76__00024__sp_W0FKI0_DOX1_PERHD