PlantSME Plant secondary metabolism enzyme database

Brassica juncea (brassica_juncea)

Imported from atlas release summary for Brassica juncea.

3334
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1088 19 BAHD (493) View species results
Alkaloid pathway 695 23 NMT (133) View species results
Phenylpropanoid pathway 689 11 POD (300) View species results
Flavonoid pathway 411 14 UFGT (250) View species results
Rosmarinic acid pathway 257 7 C4H (88) View species results
Steroid pathway 194 12 SMT1/SMT2/SMT3 (76) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Gene Pathway Family Confidence Status
BjunA06G0028130 Steroid DWF4/CYP90B1 low borderline
BjunA06G0029460 Steroid DWF4/CYP90B1 low borderline
BjunA06G0029520 Steroid DWF4/CYP90B1 low borderline
BjunA06G0029560 Steroid DWF4/CYP90B1 low borderline
BjunA07G0012190 Steroid DWF4/CYP90B1 low borderline
BjunA07G0017170 Steroid DWF4/CYP90B1 low borderline
BjunA07G0025640 Steroid DWF4/CYP90B1 low borderline
BjunA08G0016970 Steroid DWF4/CYP90B1 low borderline
BjunA08G0023900 Steroid DWF4/CYP90B1 low borderline
BjunA08G0023920 Steroid DWF4/CYP90B1 low borderline
BjunA09G0002370 Steroid DWF4/CYP90B1 low borderline
BjunA09G0002390 Steroid DWF4/CYP90B1 low borderline
BjunA09G0003380 Steroid DWF4/CYP90B1 medium borderline
BjunA09G0009860 Steroid DWF4/CYP90B1 low borderline
BjunA09G0015630 Steroid DWF4/CYP90B1 low borderline
BjunA09G0015660 Steroid DWF4/CYP90B1 low borderline
BjunA09G0015670 Steroid DWF4/CYP90B1 low borderline
BjunA09G0015680 Steroid DWF4/CYP90B1 low borderline
BjunA09G0034670 Steroid DWF4/CYP90B1 low borderline
BjunA09G0043280 Steroid DWF4/CYP90B1 low borderline
BjunA09G0043690 Steroid DWF4/CYP90B1 low borderline
BjunA09G0044460 Steroid DWF4/CYP90B1 low borderline
BjunA09G0049320 Steroid DWF4/CYP90B1 medium borderline
BjunA09G0049330 Steroid DWF4/CYP90B1 low borderline
BjunA09G0049500 Steroid DWF4/CYP90B1 medium borderline
BjunA10G0010890 Steroid DWF4/CYP90B1 low borderline
BjunA10G0020850 Steroid DWF4/CYP90B1 low borderline
BjunA10G0022590 Steroid DWF4/CYP90B1 low borderline
BjunA10G0023470 Steroid DWF4/CYP90B1 medium borderline
BjunB01G0009180 Steroid DWF4/CYP90B1 low borderline
BjunB01G0017160 Steroid DWF4/CYP90B1 low borderline
BjunB01G0021710 Steroid DWF4/CYP90B1 medium borderline
BjunB01G0022540 Steroid DWF4/CYP90B1 low borderline
BjunB01G0026710 Steroid DWF4/CYP90B1 low borderline
BjunB01G0031530 Steroid DWF4/CYP90B1 low borderline
BjunB01G0034410 Steroid DWF4/CYP90B1 medium borderline
BjunB02G0000390 Steroid DWF4/CYP90B1 low borderline
BjunB02G0005040 Steroid DWF4/CYP90B1 low borderline
BjunB02G0005930 Steroid DWF4/CYP90B1 low borderline
BjunB02G0006190 Steroid DWF4/CYP90B1 medium borderline
BjunB02G0012080 Steroid DWF4/CYP90B1 low borderline
BjunB02G0019020 Steroid DWF4/CYP90B1 low borderline
BjunB02G0019210 Steroid DWF4/CYP90B1 medium borderline
BjunB02G0025290 Steroid DWF4/CYP90B1 low borderline
BjunB02G0029390 Steroid DWF4/CYP90B1 low borderline
BjunB02G0030990 Steroid DWF4/CYP90B1 low borderline
BjunB02G0032550 Steroid DWF4/CYP90B1 low borderline
BjunB02G0033510 Steroid DWF4/CYP90B1 medium borderline
BjunB02G0038810 Steroid DWF4/CYP90B1 low borderline
BjunB02G0038820 Steroid DWF4/CYP90B1 low borderline