PlantSME Plant secondary metabolism enzyme database

Brassica juncea (brassica_juncea)

Imported from atlas release summary for Brassica juncea.

3334
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1088 19 BAHD (493) View species results
Alkaloid pathway 695 23 NMT (133) View species results
Phenylpropanoid pathway 689 11 POD (300) View species results
Flavonoid pathway 411 14 UFGT (250) View species results
Rosmarinic acid pathway 257 7 C4H (88) View species results
Steroid pathway 194 12 SMT1/SMT2/SMT3 (76) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Gene Pathway Family Confidence Status
BjunB06G0038240 Steroid DWF4/CYP90B1 low borderline
BjunB07G0008320 Steroid DWF4/CYP90B1 low borderline
BjunB07G0010270 Steroid DWF4/CYP90B1 low borderline
BjunB07G0021110 Steroid DWF4/CYP90B1 low borderline
BjunB08G0000910 Steroid DWF4/CYP90B1 medium borderline
BjunB08G0010530 Steroid DWF4/CYP90B1 low borderline
BjunB08G0010850 Steroid DWF4/CYP90B1 low borderline
BjunB08G0012820 Steroid DWF4/CYP90B1 low borderline
BjunB08G0014160 Steroid DWF4/CYP90B1 low borderline
BjunB08G0035430 Steroid DWF4/CYP90B1 low borderline
BjunB08G0042180 Steroid DWF4/CYP90B1 medium borderline
BjunContig117_503246_5437580002290 Steroid DWF4/CYP90B1 low borderline
BjunContig1514_505967_5960770009260 Steroid DWF4/CYP90B1 medium borderline
BjunContig2727_1_447810021430 Steroid DWF4/CYP90B1 low borderline
BjunContig2727_1_447810021450 Steroid DWF4/CYP90B1 low borderline
BjunContig3980031260 Steroid DWF4/CYP90B1 low borderline
BjunContig501_1525585_17300010036830 Steroid DWF4/CYP90B1 low borderline
BjunContig50520038400 Steroid DWF4/CYP90B1 low borderline
BjunContig668_1_4839870044250 Steroid DWF4/CYP90B1 low borderline
BjunContig71910045380 Steroid DWF4/CYP90B1 low borderline
BjunSuper_scaffold_182_2_9161900060300 Steroid DWF4/CYP90B1 low borderline
BjunSuper_scaffold_184_753382_15810110061460 Steroid DWF4/CYP90B1 low borderline
BjunSuper_scaffold_190_1654977_2549642_805423_8946660062240 Steroid DWF4/CYP90B1 low borderline
BjunSuper_scaffold_190_1654977_2549642_805423_8946660062250 Steroid DWF4/CYP90B1 low borderline
BjunSuper_scaffold_28_1_2326914_1_4646450064350 Steroid DWF4/CYP90B1 medium borderline
BjunSuper_scaffold_40_2508543_4711922_1153965_22033800065770 Steroid DWF4/CYP90B1 low borderline
BjunSuper_scaffold_5_1_6334723_245229_7451470067990 Steroid DWF4/CYP90B1 low borderline
BjunSuper_scaffold_5_1_6334723_745148_63347230068490 Steroid DWF4/CYP90B1 medium borderline
BjunSuper_scaffold_79_1679884_21839240072990 Steroid DWF4/CYP90B1 low borderline