PlantSME Plant secondary metabolism enzyme database

Brassica juncea (brassica_juncea)

Imported from atlas release summary for Brassica juncea.

4298
Candidate Protein Records
3334
Pathway-Level Records
8339
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1088 19 BAHD (493) View species results
Alkaloid pathway 695 23 NMT (133) View species results
Phenylpropanoid pathway 689 11 POD (300) View species results
Flavonoid pathway 411 14 UFGT (250) View species results
Rosmarinic acid pathway 257 7 C4H (88) View species results
Steroid pathway 194 12 SMT1/SMT2/SMT3 (76) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Protein/Isoform Record Pathway Family Confidence Status
BjunB08G0016010 Flavonoid F3H low borderline
BjunB08G0016970 Flavonoid F3H low borderline
BjunB08G0018060 Flavonoid F3H medium borderline
BjunB08G0028170 Flavonoid F3H medium borderline
BjunB08G0031860 Flavonoid F3H low borderline
BjunB08G0031890 Flavonoid F3H low borderline
BjunB08G0036040 Flavonoid F3H medium borderline
BjunB08G0036880 Flavonoid F3H medium borderline
BjunB08G0037710 Flavonoid F3H low borderline
BjunB08G0040220 Flavonoid F3H low borderline
BjunB08G0040230 Flavonoid F3H medium pass
BjunB08G0041060 Flavonoid F3H low borderline
BjunB08G0041910 Flavonoid F3H low borderline
BjunB08G0045810 Flavonoid F3H medium borderline
BjunContig16620011680 Flavonoid F3H low borderline
BjunContig19970015420 Flavonoid F3H low borderline
BjunContig3759_127079_2084700029370 Flavonoid F3H low borderline
BjunContig4310033130 Flavonoid F3H low borderline
BjunContig4310033140 Flavonoid F3H low borderline
BjunContig4310033160 Flavonoid F3H low borderline
BjunContig4310033170 Flavonoid F3H low borderline
BjunContig5500040800 Flavonoid F3H low borderline
BjunContig71_869334_18815850046300 Flavonoid F3H medium borderline
BjunContig8310049650 Flavonoid F3H low borderline
BjunContig8310049660 Flavonoid F3H medium pass
BjunContig8370050680 Flavonoid F3H medium borderline
BjunContig84200050840 Flavonoid F3H medium pass
BjunSuper_scaffold_109_3169392_4351964_52914_5676090054500 Flavonoid F3H medium borderline
BjunSuper_scaffold_109_3169392_4351964_52914_5676090054520 Flavonoid F3H medium borderline
BjunSuper_scaffold_147_811596_8508930058640 Flavonoid F3H low borderline
BjunSuper_scaffold_1500058910 Flavonoid F3H low borderline
BjunSuper_scaffold_28_1_2326914_1_4646450064120 Flavonoid F3H low borderline
BjunSuper_scaffold_40_756397_14457000066340 Flavonoid F3H medium borderline
BjunSuper_scaffold_5_1_6334723_245229_7451470068370 Flavonoid F3H medium borderline
BjunSuper_scaffold_750071020 Flavonoid F3H medium borderline
BjunSuper_scaffold_87_1_3273820074470 Flavonoid F3H medium borderline