PlantSME Plant secondary metabolism enzyme database

Brassica juncea (brassica_juncea)

Imported from atlas release summary for Brassica juncea.

3334
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1088 19 BAHD (493) View species results
Alkaloid pathway 695 23 NMT (133) View species results
Phenylpropanoid pathway 689 11 POD (300) View species results
Flavonoid pathway 411 14 UFGT (250) View species results
Rosmarinic acid pathway 257 7 C4H (88) View species results
Steroid pathway 194 12 SMT1/SMT2/SMT3 (76) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: G8O/G8H
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Gene Pathway Family Confidence Status
BjunB01G0011550 Alkaloid G8O/G8H low borderline
BjunB02G0005930 Alkaloid G8O/G8H medium borderline
BjunB02G0011120 Alkaloid G8O/G8H medium borderline
BjunB02G0012080 Alkaloid G8O/G8H medium borderline
BjunB02G0029390 Alkaloid G8O/G8H medium borderline
BjunB02G0032550 Alkaloid G8O/G8H medium borderline
BjunB02G0038780 Alkaloid G8O/G8H low borderline
BjunB02G0038870 Alkaloid G8O/G8H medium borderline
BjunB02G0038890 Alkaloid G8O/G8H medium pass
BjunB02G0055600 Alkaloid G8O/G8H medium borderline
BjunB02G0056090 Alkaloid G8O/G8H medium borderline
BjunB04G0003660 Alkaloid G8O/G8H medium borderline
BjunB04G0004490 Alkaloid G8O/G8H medium borderline
BjunB04G0004510 Alkaloid G8O/G8H medium borderline
BjunB04G0008690 Alkaloid G8O/G8H low borderline
BjunB04G0012670 Alkaloid G8O/G8H medium borderline
BjunB04G0023550 Alkaloid G8O/G8H medium borderline
BjunB05G0045720 Alkaloid G8O/G8H medium borderline
BjunB06G0023910 Alkaloid G8O/G8H medium borderline
BjunB06G0030830 Alkaloid G8O/G8H medium borderline
BjunB06G0033820 Alkaloid G8O/G8H medium borderline
BjunB06G0034150 Alkaloid G8O/G8H medium pass
BjunB06G0034160 Alkaloid G8O/G8H medium borderline
BjunB07G0007360 Alkaloid G8O/G8H medium pass
BjunB07G0008350 Alkaloid G8O/G8H low borderline
BjunB07G0021110 Alkaloid G8O/G8H medium borderline
BjunB07G0025770 Alkaloid G8O/G8H medium borderline
BjunB07G0028160 Alkaloid G8O/G8H low borderline
BjunB08G0010530 Alkaloid G8O/G8H medium borderline
BjunB08G0014160 Alkaloid G8O/G8H medium borderline
BjunB08G0024240 Alkaloid G8O/G8H medium borderline
BjunB08G0024750 Alkaloid G8O/G8H medium borderline
BjunB08G0028790 Alkaloid G8O/G8H medium borderline
BjunB08G0030740 Alkaloid G8O/G8H medium borderline
BjunB08G0038580 Alkaloid G8O/G8H medium borderline
BjunContig14300008600 Alkaloid G8O/G8H medium borderline
BjunContig2275_349600_5193380017720 Alkaloid G8O/G8H low borderline
BjunContig781_1492275_15331450048530 Alkaloid G8O/G8H medium borderline
BjunContig781_1492275_15331450048540 Alkaloid G8O/G8H medium pass
BjunContig81270048900 Alkaloid G8O/G8H low borderline