PlantSME Plant secondary metabolism enzyme database

Brassica juncea (brassica_juncea)

Imported from atlas release summary for Brassica juncea.

3334
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1088 19 BAHD (493) View species results
Alkaloid pathway 695 23 NMT (133) View species results
Phenylpropanoid pathway 689 11 POD (300) View species results
Flavonoid pathway 411 14 UFGT (250) View species results
Rosmarinic acid pathway 257 7 C4H (88) View species results
Steroid pathway 194 12 SMT1/SMT2/SMT3 (76) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: HCT
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Gene Pathway Family Confidence Status
BjunA01G0012850 Phenylpropanoid HCT low borderline
BjunA01G0017410 Phenylpropanoid HCT medium pass
BjunA01G0018030 Phenylpropanoid HCT low borderline
BjunA02G0000420 Phenylpropanoid HCT low borderline
BjunA02G0002400 Phenylpropanoid HCT low borderline
BjunA02G0028360 Phenylpropanoid HCT low borderline
BjunA03G0009620 Phenylpropanoid HCT medium pass
BjunA03G0009630 Phenylpropanoid HCT medium pass
BjunA04G0022470 Phenylpropanoid HCT low borderline
BjunA05G0005640 Phenylpropanoid HCT low borderline
BjunA06G0014630 Phenylpropanoid HCT medium pass
BjunA06G0020640 Phenylpropanoid HCT medium pass
BjunA06G0023390 Phenylpropanoid HCT medium pass
BjunA07G0000540 Phenylpropanoid HCT medium pass
BjunA07G0015200 Phenylpropanoid HCT medium pass
BjunA08G0019010 Phenylpropanoid HCT low borderline
BjunA09G0003180 Phenylpropanoid HCT medium pass
BjunA09G0005340 Phenylpropanoid HCT low borderline
BjunA09G0005360 Phenylpropanoid HCT low borderline
BjunA09G0010000 Phenylpropanoid HCT medium pass
BjunA09G0025580 Phenylpropanoid HCT low borderline
BjunA09G0029480 Phenylpropanoid HCT low borderline
BjunA10G0003150 Phenylpropanoid HCT low borderline
BjunA10G0020620 Phenylpropanoid HCT low borderline
BjunA10G0025490 Phenylpropanoid HCT medium pass
BjunB01G0005730 Phenylpropanoid HCT low borderline
BjunB01G0005890 Phenylpropanoid HCT low borderline
BjunB01G0018570 Phenylpropanoid HCT medium pass
BjunB02G0009370 Phenylpropanoid HCT medium pass
BjunB02G0017740 Phenylpropanoid HCT medium pass
BjunB02G0027450 Phenylpropanoid HCT low borderline
BjunB02G0031570 Phenylpropanoid HCT low borderline
BjunB03G0011910 Phenylpropanoid HCT low borderline
BjunB03G0047400 Phenylpropanoid HCT medium pass
BjunB04G0001180 Phenylpropanoid HCT low borderline
BjunB04G0003380 Phenylpropanoid HCT low borderline
BjunB04G0018610 Phenylpropanoid HCT medium pass
BjunB05G0011850 Phenylpropanoid HCT low borderline
BjunB05G0014160 Phenylpropanoid HCT low borderline
BjunB05G0023510 Phenylpropanoid HCT medium pass
BjunB05G0025850 Phenylpropanoid HCT low borderline
BjunB05G0042310 Phenylpropanoid HCT low borderline
BjunB06G0003470 Phenylpropanoid HCT low borderline
BjunB06G0003690 Phenylpropanoid HCT low borderline
BjunB06G0009240 Phenylpropanoid HCT medium pass
BjunB06G0014890 Phenylpropanoid HCT medium pass
BjunB06G0014900 Phenylpropanoid HCT medium pass
BjunB06G0023360 Phenylpropanoid HCT low borderline
BjunB06G0027450 Phenylpropanoid HCT low borderline
BjunB06G0031950 Phenylpropanoid HCT low borderline