PlantSME Plant secondary metabolism enzyme database

Brassica juncea (brassica_juncea)

Imported from atlas release summary for Brassica juncea.

3334
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1088 19 BAHD (493) View species results
Alkaloid pathway 695 23 NMT (133) View species results
Phenylpropanoid pathway 689 11 POD (300) View species results
Flavonoid pathway 411 14 UFGT (250) View species results
Rosmarinic acid pathway 257 7 C4H (88) View species results
Steroid pathway 194 12 SMT1/SMT2/SMT3 (76) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAMT
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Gene Pathway Family Confidence Status
BjunA01G0001950 Alkaloid LAMT medium pass
BjunA01G0014390 Alkaloid LAMT medium borderline
BjunA01G0021670 Alkaloid LAMT medium borderline
BjunA02G0014810 Alkaloid LAMT medium borderline
BjunA02G0015610 Alkaloid LAMT medium borderline
BjunA03G0001430 Alkaloid LAMT medium borderline
BjunA03G0010450 Alkaloid LAMT medium borderline
BjunA03G0015240 Alkaloid LAMT low borderline
BjunA03G0029680 Alkaloid LAMT medium borderline
BjunA03G0051250 Alkaloid LAMT medium borderline
BjunA05G0027720 Alkaloid LAMT medium borderline
BjunA06G0010640 Alkaloid LAMT medium borderline
BjunA07G0011840 Alkaloid LAMT medium borderline
BjunA07G0014560 Alkaloid LAMT medium borderline
BjunA07G0022820 Alkaloid LAMT medium borderline
BjunA07G0023920 Alkaloid LAMT medium pass
BjunA07G0024000 Alkaloid LAMT medium borderline
BjunA08G0014830 Alkaloid LAMT medium pass
BjunA08G0015220 Alkaloid LAMT low borderline
BjunA08G0017310 Alkaloid LAMT medium borderline
BjunA09G0004330 Alkaloid LAMT medium borderline
BjunA09G0033980 Alkaloid LAMT medium borderline
BjunA09G0044960 Alkaloid LAMT medium borderline
BjunA10G0009280 Alkaloid LAMT medium borderline
BjunA10G0023640 Alkaloid LAMT medium borderline
BjunA10G0023650 Alkaloid LAMT medium borderline
BjunB01G0001150 Alkaloid LAMT medium borderline
BjunB01G0033780 Alkaloid LAMT low borderline
BjunB02G0012990 Alkaloid LAMT medium borderline
BjunB02G0014020 Alkaloid LAMT medium borderline
BjunB02G0033710 Alkaloid LAMT medium borderline
BjunB02G0033730 Alkaloid LAMT medium borderline
BjunB02G0055480 Alkaloid LAMT medium borderline
BjunB03G0024150 Alkaloid LAMT medium borderline
BjunB03G0030090 Alkaloid LAMT low borderline
BjunB03G0035910 Alkaloid LAMT medium borderline
BjunB03G0040370 Alkaloid LAMT low borderline
BjunB04G0016600 Alkaloid LAMT medium borderline
BjunB05G0002600 Alkaloid LAMT medium borderline
BjunB05G0021370 Alkaloid LAMT medium borderline
BjunB05G0026500 Alkaloid LAMT medium borderline
BjunB05G0037550 Alkaloid LAMT medium borderline
BjunB06G0013830 Alkaloid LAMT medium borderline
BjunB06G0016090 Alkaloid LAMT medium borderline
BjunB06G0016100 Alkaloid LAMT medium borderline
BjunB06G0016110 Alkaloid LAMT medium borderline
BjunB06G0032650 Alkaloid LAMT medium borderline
BjunB07G0023420 Alkaloid LAMT medium borderline
BjunContig5030038380 Alkaloid LAMT medium borderline
BjunSuper_scaffold_182_2_9161900060380 Alkaloid LAMT low borderline