PlantSME Plant secondary metabolism enzyme database

Brassica juncea (brassica_juncea)

Imported from atlas release summary for Brassica juncea.

3334
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1088 19 BAHD (493) View species results
Alkaloid pathway 695 23 NMT (133) View species results
Phenylpropanoid pathway 689 11 POD (300) View species results
Flavonoid pathway 411 14 UFGT (250) View species results
Rosmarinic acid pathway 257 7 C4H (88) View species results
Steroid pathway 194 12 SMT1/SMT2/SMT3 (76) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PAL
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Gene Pathway Family Confidence Status
BjunA02G0001330 Flavonoid PAL medium pass
BjunA04G0004880 Flavonoid PAL medium pass
BjunA04G0004890 Flavonoid PAL high pass
BjunA04G0011110 Flavonoid PAL high pass
BjunA04G0020780 Flavonoid PAL high pass
BjunA05G0006870 Flavonoid PAL high pass
BjunB01G0007680 Flavonoid PAL high pass
BjunB05G0006050 Flavonoid PAL high pass
BjunB05G0006580 Flavonoid PAL medium pass
BjunB05G0024920 Flavonoid PAL medium pass
BjunB05G0024930 Flavonoid PAL high pass
BjunB06G0005800 Flavonoid PAL high pass
BjunB06G0033000 Flavonoid PAL low borderline
BjunB06G0037280 Flavonoid PAL high pass
BjunB08G0017300 Flavonoid PAL high pass
BjunB08G0045240 Flavonoid PAL high pass
BjunContig444_592386_2116916_1449544_14826490034100 Flavonoid PAL high pass
BjunA02G0001330 Phenylpropanoid PAL medium pass
BjunA04G0004880 Phenylpropanoid PAL medium pass
BjunA04G0004890 Phenylpropanoid PAL high pass
BjunA04G0011110 Phenylpropanoid PAL high pass
BjunA04G0020780 Phenylpropanoid PAL high pass
BjunA05G0006870 Phenylpropanoid PAL high pass
BjunB01G0007680 Phenylpropanoid PAL high pass
BjunB05G0006050 Phenylpropanoid PAL high pass
BjunB05G0006580 Phenylpropanoid PAL medium pass
BjunB05G0024920 Phenylpropanoid PAL medium pass
BjunB05G0024930 Phenylpropanoid PAL high pass
BjunB06G0005800 Phenylpropanoid PAL high pass
BjunB06G0033000 Phenylpropanoid PAL low borderline
BjunB06G0037280 Phenylpropanoid PAL high pass
BjunB08G0017300 Phenylpropanoid PAL high pass
BjunB08G0045240 Phenylpropanoid PAL high pass
BjunContig444_592386_2116916_1449544_14826490034100 Phenylpropanoid PAL high pass
BjunA02G0001330 Rosmarinic Acid PAL medium pass
BjunA04G0004880 Rosmarinic Acid PAL medium pass
BjunA04G0004890 Rosmarinic Acid PAL high pass
BjunA04G0011110 Rosmarinic Acid PAL high pass
BjunA04G0020780 Rosmarinic Acid PAL high pass
BjunA05G0006870 Rosmarinic Acid PAL high pass
BjunB01G0007680 Rosmarinic Acid PAL high pass
BjunB05G0006050 Rosmarinic Acid PAL high pass
BjunB05G0006580 Rosmarinic Acid PAL medium pass
BjunB05G0024920 Rosmarinic Acid PAL medium pass
BjunB05G0024930 Rosmarinic Acid PAL high pass
BjunB06G0005800 Rosmarinic Acid PAL high pass
BjunB06G0033000 Rosmarinic Acid PAL low borderline
BjunB06G0037280 Rosmarinic Acid PAL high pass
BjunB08G0017300 Rosmarinic Acid PAL high pass
BjunB08G0045240 Rosmarinic Acid PAL high pass