PlantSME Plant secondary metabolism enzyme database

Brassica juncea (brassica_juncea)

Imported from atlas release summary for Brassica juncea.

3334
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1088 19 BAHD (493) View species results
Alkaloid pathway 695 23 NMT (133) View species results
Phenylpropanoid pathway 689 11 POD (300) View species results
Flavonoid pathway 411 14 UFGT (250) View species results
Rosmarinic acid pathway 257 7 C4H (88) View species results
Steroid pathway 194 12 SMT1/SMT2/SMT3 (76) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PYKS
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Gene Pathway Family Confidence Status
BjunB02G0033580 Alkaloid PYKS low borderline
BjunB02G0036490 Alkaloid PYKS low borderline
BjunB02G0046310 Alkaloid PYKS low borderline
BjunB02G0054350 Alkaloid PYKS low borderline
BjunB02G0054580 Alkaloid PYKS high pass
BjunB03G0001920 Alkaloid PYKS low borderline
BjunB03G0014680 Alkaloid PYKS low borderline
BjunB03G0014690 Alkaloid PYKS low borderline
BjunB03G0015050 Alkaloid PYKS low borderline
BjunB03G0015060 Alkaloid PYKS low borderline
BjunB03G0015230 Alkaloid PYKS high pass
BjunB03G0021360 Alkaloid PYKS high pass
BjunB03G0024100 Alkaloid PYKS low borderline
BjunB03G0029460 Alkaloid PYKS low borderline
BjunB03G0031490 Alkaloid PYKS low borderline
BjunB03G0031700 Alkaloid PYKS low borderline
BjunB03G0034870 Alkaloid PYKS low borderline
BjunB03G0044620 Alkaloid PYKS low borderline
BjunB04G0002720 Alkaloid PYKS low borderline
BjunB04G0002870 Alkaloid PYKS high pass
BjunB04G0015160 Alkaloid PYKS low borderline
BjunB04G0019740 Alkaloid PYKS low borderline
BjunB05G0000830 Alkaloid PYKS high pass
BjunB05G0003530 Alkaloid PYKS high pass
BjunB05G0003940 Alkaloid PYKS low borderline
BjunB05G0015510 Alkaloid PYKS high pass
BjunB05G0015530 Alkaloid PYKS high pass
BjunB05G0024850 Alkaloid PYKS low borderline
BjunB06G0014000 Alkaloid PYKS low borderline
BjunB06G0018000 Alkaloid PYKS low borderline
BjunB06G0022800 Alkaloid PYKS low borderline
BjunB08G0004350 Alkaloid PYKS high pass
BjunB08G0021410 Alkaloid PYKS medium pass
BjunB08G0040030 Alkaloid PYKS low borderline
BjunContig47810035830 Alkaloid PYKS low borderline
BjunContig824_1_1173840049300 Alkaloid PYKS low borderline
BjunSuper_scaffold_120_122617_7993060055450 Alkaloid PYKS low borderline
BjunSuper_scaffold_199_1693331_32295160063050 Alkaloid PYKS low borderline