PlantSME Plant secondary metabolism enzyme database

Brassica juncea (brassica_juncea)

Imported from atlas release summary for Brassica juncea.

3334
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1088 19 BAHD (493) View species results
Alkaloid pathway 695 23 NMT (133) View species results
Phenylpropanoid pathway 689 11 POD (300) View species results
Flavonoid pathway 411 14 UFGT (250) View species results
Rosmarinic acid pathway 257 7 C4H (88) View species results
Steroid pathway 194 12 SMT1/SMT2/SMT3 (76) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
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Gene Pathway Family Confidence Status
BjunB02G0033510 Alkaloid T16H medium borderline
BjunB02G0042090 Alkaloid T16H medium borderline
BjunB03G0003780 Alkaloid T16H medium borderline
BjunB03G0003850 Alkaloid T16H medium borderline
BjunB03G0004670 Alkaloid T16H medium borderline
BjunB03G0004680 Alkaloid T16H medium borderline
BjunB03G0049400 Alkaloid T16H medium borderline
BjunB04G0004460 Alkaloid T16H low borderline
BjunB04G0004700 Alkaloid T16H low borderline
BjunB04G0007970 Alkaloid T16H medium borderline
BjunB04G0008650 Alkaloid T16H medium pass
BjunB04G0008660 Alkaloid T16H low borderline
BjunB04G0008670 Alkaloid T16H medium pass
BjunB04G0008680 Alkaloid T16H medium borderline
BjunB04G0008710 Alkaloid T16H medium borderline
BjunB04G0020940 Alkaloid T16H medium borderline
BjunB04G0029790 Alkaloid T16H medium borderline
BjunB04G0035880 Alkaloid T16H low borderline
BjunB05G0000320 Alkaloid T16H low borderline
BjunB05G0023820 Alkaloid T16H medium borderline
BjunB05G0044120 Alkaloid T16H low borderline
BjunB06G0003000 Alkaloid T16H medium borderline
BjunB06G0007530 Alkaloid T16H medium borderline
BjunB06G0032900 Alkaloid T16H medium borderline
BjunB06G0034170 Alkaloid T16H medium borderline
BjunB07G0008330 Alkaloid T16H medium borderline
BjunB07G0008340 Alkaloid T16H medium borderline
BjunB07G0010270 Alkaloid T16H medium borderline
BjunB07G0025760 Alkaloid T16H medium borderline
BjunB07G0025780 Alkaloid T16H medium borderline
BjunB08G0010850 Alkaloid T16H low borderline
BjunB08G0014040 Alkaloid T16H medium borderline
BjunB08G0014050 Alkaloid T16H medium borderline
BjunB08G0024840 Alkaloid T16H medium borderline
BjunB08G0035430 Alkaloid T16H low borderline
BjunB08G0042180 Alkaloid T16H medium borderline
BjunContig117_503246_5437580002290 Alkaloid T16H low borderline
BjunContig197_1_5304640014670 Alkaloid T16H medium borderline
BjunContig2727_1_447810021430 Alkaloid T16H medium borderline
BjunContig347_1_255857_209037_2558570026870 Alkaloid T16H medium borderline
BjunContig406_1_1842380031620 Alkaloid T16H medium borderline
BjunContig5330039350 Alkaloid T16H medium borderline
BjunContig79250048730 Alkaloid T16H medium borderline
BjunSuper_scaffold_28_1_2326914_1_4646450064350 Alkaloid T16H medium borderline
BjunSuper_scaffold_750071200 Alkaloid T16H medium borderline
BjunSuper_scaffold_750071890 Alkaloid T16H medium borderline