PlantSME Plant secondary metabolism enzyme database

Brassica juncea (brassica_juncea)

Imported from atlas release summary for Brassica juncea.

3334
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1088 19 BAHD (493) View species results
Alkaloid pathway 695 23 NMT (133) View species results
Phenylpropanoid pathway 689 11 POD (300) View species results
Flavonoid pathway 411 14 UFGT (250) View species results
Rosmarinic acid pathway 257 7 C4H (88) View species results
Steroid pathway 194 12 SMT1/SMT2/SMT3 (76) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
BjunA04G0023340 Alkaloid T3O medium borderline
BjunA04G0024820 Alkaloid T3O medium borderline
BjunA05G0003280 Alkaloid T3O medium pass
BjunA05G0008880 Alkaloid T3O medium pass
BjunA05G0010550 Alkaloid T3O medium pass
BjunA05G0016510 Alkaloid T3O medium borderline
BjunA05G0025870 Alkaloid T3O medium pass
BjunA06G0006340 Alkaloid T3O medium borderline
BjunA06G0006350 Alkaloid T3O medium borderline
BjunA06G0006520 Alkaloid T3O medium pass
BjunA06G0014760 Alkaloid T3O low borderline
BjunA06G0018620 Alkaloid T3O low borderline
BjunA06G0020300 Alkaloid T3O low borderline
BjunA06G0023520 Alkaloid T3O medium borderline
BjunA06G0027570 Alkaloid T3O medium pass
BjunA06G0028710 Alkaloid T3O low borderline
BjunA06G0029460 Alkaloid T3O medium borderline
BjunA06G0029470 Alkaloid T3O medium borderline
BjunA06G0029520 Alkaloid T3O medium borderline
BjunA06G0029530 Alkaloid T3O medium borderline
BjunA06G0029560 Alkaloid T3O medium borderline
BjunA06G0036050 Alkaloid T3O medium borderline
BjunA07G0005490 Alkaloid T3O medium borderline
BjunA07G0012190 Alkaloid T3O medium borderline
BjunA07G0013480 Alkaloid T3O low borderline
BjunA07G0028380 Alkaloid T3O medium pass
BjunA07G0028960 Alkaloid T3O medium borderline
BjunA08G0002540 Alkaloid T3O medium pass
BjunA08G0006490 Alkaloid T3O low borderline
BjunA08G0008100 Alkaloid T3O low borderline
BjunA08G0016990 Alkaloid T3O medium borderline
BjunA08G0023900 Alkaloid T3O medium borderline
BjunA09G0002410 Alkaloid T3O medium pass
BjunA09G0003380 Alkaloid T3O medium pass
BjunA09G0009860 Alkaloid T3O medium borderline
BjunA09G0014240 Alkaloid T3O medium borderline
BjunA09G0018050 Alkaloid T3O medium pass
BjunA09G0034670 Alkaloid T3O medium borderline
BjunA09G0034690 Alkaloid T3O medium borderline
BjunA09G0034700 Alkaloid T3O medium borderline
BjunA09G0037830 Alkaloid T3O medium pass
BjunA09G0043760 Alkaloid T3O medium borderline
BjunA09G0043910 Alkaloid T3O low borderline
BjunA09G0048340 Alkaloid T3O medium borderline
BjunA09G0049320 Alkaloid T3O medium borderline
BjunA09G0049330 Alkaloid T3O medium borderline
BjunA09G0049500 Alkaloid T3O medium pass
BjunA09G0054230 Alkaloid T3O low borderline
BjunA10G0004380 Alkaloid T3O low borderline
BjunA10G0004390 Alkaloid T3O low borderline