PlantSME Plant secondary metabolism enzyme database

Brassica juncea (brassica_juncea)

Imported from atlas release summary for Brassica juncea.

3334
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1088 19 BAHD (493) View species results
Alkaloid pathway 695 23 NMT (133) View species results
Phenylpropanoid pathway 689 11 POD (300) View species results
Flavonoid pathway 411 14 UFGT (250) View species results
Rosmarinic acid pathway 257 7 C4H (88) View species results
Steroid pathway 194 12 SMT1/SMT2/SMT3 (76) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TPS
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Gene Pathway Family Confidence Status Best Target
BjunB04G0014510 Terpenoid TPS low borderline TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
BjunB05G0017720 Terpenoid TPS medium pass TPS__00008__sp_A0A167V661_TPS8_CAMSI
BjunB05G0019740 Terpenoid TPS medium pass TPS__00149__sp_P0DI76_CIN1_ARATH
BjunB05G0028060 Terpenoid TPS medium pass TPS__00005__sp_A0A140KFG9_TPS1_CAMBE
BjunB05G0028460 Terpenoid TPS medium pass TPS__00045__sp_A0A4Y5L9K3_T16CC_CANSA
BjunB06G0031680 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
BjunB06G0038730 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
BjunB07G0004700 Terpenoid TPS medium pass TPS__00040__sp_A0A348AUV6_TPS1B_CAMHI
BjunB07G0011680 Terpenoid TPS medium pass TPS__00061__sp_B9SBU9_TPS5_RICCO
BjunB07G0016040 Terpenoid TPS medium pass TPS__00119__sp_G8H5N3_TPS16_SOLLC
BjunB07G0016050 Terpenoid TPS medium pass TPS__00008__sp_A0A167V661_TPS8_CAMSI
BjunB07G0025130 Terpenoid TPS medium pass TPS__00008__sp_A0A167V661_TPS8_CAMSI
BjunB07G0025140 Terpenoid TPS medium pass TPS__00076__sp_D0UZK2_TPS1_CITSI
BjunB07G0032690 Terpenoid TPS medium pass TPS__00001__sp_A0A0D4D912_TPS3_XANST
BjunB07G0034690 Terpenoid TPS medium pass TPS__00045__sp_A0A4Y5L9K3_T16CC_CANSA
BjunB07G0035630 Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
BjunB08G0024930 Terpenoid TPS medium pass TPS__00149__sp_P0DI76_CIN1_ARATH
BjunB08G0026300 Terpenoid TPS medium pass TPS__00149__sp_P0DI76_CIN1_ARATH
BjunContig44070034040 Terpenoid TPS medium pass TPS__00008__sp_A0A167V661_TPS8_CAMSI
BjunContig69640044890 Terpenoid TPS medium pass TPS__00078__sp_D5KXD2_TPS12_SOLLC