PlantSME Plant secondary metabolism enzyme database

Brassica juncea (brassica_juncea)

Imported from atlas release summary for Brassica juncea.

3334
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1088 19 BAHD (493) View species results
Alkaloid pathway 695 23 NMT (133) View species results
Phenylpropanoid pathway 689 11 POD (300) View species results
Flavonoid pathway 411 14 UFGT (250) View species results
Rosmarinic acid pathway 257 7 C4H (88) View species results
Steroid pathway 194 12 SMT1/SMT2/SMT3 (76) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
Reset
Gene Pathway Family Confidence Status Best Target
BjunA01G0008730 Phenylpropanoid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
BjunA01G0012180 Phenylpropanoid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
BjunA01G0029040 Phenylpropanoid 4CL low borderline 4CL__00018__sp_Q9S777_4CL3_ARATH
BjunA02G0005750 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
BjunA02G0008580 Phenylpropanoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
BjunA02G0014590 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
BjunA02G0019440 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
BjunA02G0020210 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
BjunA02G0024110 Phenylpropanoid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
BjunA02G0037050 Phenylpropanoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
BjunA03G0027750 Phenylpropanoid 4CL low borderline 4CL__00018__sp_Q9S777_4CL3_ARATH
BjunA03G0033690 Phenylpropanoid 4CL medium pass 4CL__00015__sp_Q9LU36_4CL4_ARATH
BjunA03G0033710 Phenylpropanoid 4CL medium pass 4CL__00015__sp_Q9LU36_4CL4_ARATH
BjunA03G0034810 Phenylpropanoid 4CL low borderline 4CL__00012__sp_Q84P21_4CLL5_ARATH
BjunA03G0035570 Phenylpropanoid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
BjunA03G0035670 Phenylpropanoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
BjunA03G0036030 Phenylpropanoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
BjunA04G0011420 Phenylpropanoid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
BjunA05G0000540 Phenylpropanoid 4CL low borderline 4CL__00015__sp_Q9LU36_4CL4_ARATH
BjunA05G0016870 Phenylpropanoid 4CL low borderline 4CL__00006__sp_P17814_4CL1_ORYSJ
BjunA05G0021250 Phenylpropanoid 4CL medium pass 4CL__00015__sp_Q9LU36_4CL4_ARATH
BjunA05G0021310 Phenylpropanoid 4CL medium pass 4CL__00015__sp_Q9LU36_4CL4_ARATH
BjunA05G0024530 Phenylpropanoid 4CL low borderline 4CL__00018__sp_Q9S777_4CL3_ARATH
BjunA05G0030800 Phenylpropanoid 4CL low borderline 4CL__00018__sp_Q9S777_4CL3_ARATH
BjunA06G0012610 Phenylpropanoid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
BjunA06G0012620 Phenylpropanoid 4CL medium pass 4CL__00005__sp_P0C5B6_4CLL4_ARATH
BjunA06G0012640 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
BjunA06G0013570 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
BjunA06G0014410 Phenylpropanoid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
BjunA06G0026050 Phenylpropanoid 4CL low borderline 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ
BjunA07G0002350 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
BjunA07G0011430 Phenylpropanoid 4CL medium pass 4CL__00005__sp_P0C5B6_4CLL4_ARATH
BjunA07G0011440 Phenylpropanoid 4CL medium pass 4CL__00005__sp_P0C5B6_4CLL4_ARATH
BjunA07G0020410 Phenylpropanoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
BjunA07G0023230 Phenylpropanoid 4CL medium pass 4CL__00018__sp_Q9S777_4CL3_ARATH
BjunA07G0023480 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
BjunA07G0031280 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
BjunA08G0005030 Phenylpropanoid 4CL medium pass 4CL__00015__sp_Q9LU36_4CL4_ARATH
BjunA08G0005040 Phenylpropanoid 4CL medium pass 4CL__00015__sp_Q9LU36_4CL4_ARATH
BjunA08G0005050 Phenylpropanoid 4CL medium pass 4CL__00015__sp_Q9LU36_4CL4_ARATH
BjunA08G0005060 Phenylpropanoid 4CL medium pass 4CL__00015__sp_Q9LU36_4CL4_ARATH
BjunA08G0021480 Phenylpropanoid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
BjunA08G0021490 Phenylpropanoid 4CL medium pass 4CL__00005__sp_P0C5B6_4CLL4_ARATH
BjunA08G0021500 Phenylpropanoid 4CL medium pass 4CL__00005__sp_P0C5B6_4CLL4_ARATH
BjunA08G0021510 Phenylpropanoid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
BjunA09G0010740 Phenylpropanoid 4CL medium pass 4CL__00002__sp_I3PB37_4CL1_PETHY
BjunA09G0013510 Phenylpropanoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
BjunA09G0022510 Phenylpropanoid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
BjunA09G0023830 Phenylpropanoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
BjunA09G0023840 Phenylpropanoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH