PlantSME Plant secondary metabolism enzyme database

Brassica juncea (brassica_juncea)

Imported from atlas release summary for Brassica juncea.

4298
Candidate Protein Records
3334
Pathway-Level Records
8339
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1088 19 BAHD (493) View species results
Alkaloid pathway 695 23 NMT (133) View species results
Phenylpropanoid pathway 689 11 POD (300) View species results
Flavonoid pathway 411 14 UFGT (250) View species results
Rosmarinic acid pathway 257 7 C4H (88) View species results
Steroid pathway 194 12 SMT1/SMT2/SMT3 (76) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
BjunB07G0028160 Rosmarinic Acid C4H low borderline
BjunB07G0028520 Rosmarinic Acid C4H low borderline
BjunB07G0033050 Rosmarinic Acid C4H low borderline
BjunB08G0000910 Rosmarinic Acid C4H low borderline
BjunB08G0010530 Rosmarinic Acid C4H medium pass
BjunB08G0014040 Rosmarinic Acid C4H medium pass
BjunB08G0014050 Rosmarinic Acid C4H medium pass
BjunB08G0014160 Rosmarinic Acid C4H low borderline
BjunB08G0019880 Rosmarinic Acid C4H medium pass
BjunB08G0024240 Rosmarinic Acid C4H low borderline
BjunB08G0024750 Rosmarinic Acid C4H medium pass
BjunB08G0024840 Rosmarinic Acid C4H low borderline
BjunB08G0025180 Rosmarinic Acid C4H low borderline
BjunB08G0028790 Rosmarinic Acid C4H medium pass
BjunB08G0030740 Rosmarinic Acid C4H low borderline
BjunB08G0035020 Rosmarinic Acid C4H low borderline
BjunB08G0038580 Rosmarinic Acid C4H low borderline
BjunB08G0039310 Rosmarinic Acid C4H low borderline
BjunB08G0042180 Rosmarinic Acid C4H low borderline
BjunContig118_1274036_2398663_676985_7559810002570 Rosmarinic Acid C4H low borderline
BjunContig12320005220 Rosmarinic Acid C4H low borderline
BjunContig14300008600 Rosmarinic Acid C4H low borderline
BjunContig184_1_1098370013970 Rosmarinic Acid C4H low borderline
BjunContig197_1_5304640014670 Rosmarinic Acid C4H low borderline
BjunContig23170018270 Rosmarinic Acid C4H medium pass
BjunContig2727_1_447810021430 Rosmarinic Acid C4H low borderline
BjunContig2727_1_447810021450 Rosmarinic Acid C4H low borderline
BjunContig347_1_255857_209037_2558570026870 Rosmarinic Acid C4H low borderline
BjunContig3980031260 Rosmarinic Acid C4H low borderline
BjunContig406_1_1842380031620 Rosmarinic Acid C4H medium pass
BjunContig501_1525585_17300010036830 Rosmarinic Acid C4H low borderline
BjunContig501_1_1525584_15001_10356590037870 Rosmarinic Acid C4H low borderline
BjunContig50520038400 Rosmarinic Acid C4H low borderline
BjunContig5330039350 Rosmarinic Acid C4H low borderline
BjunContig668_1_4839870044000 Rosmarinic Acid C4H low borderline
BjunContig668_1_4839870044250 Rosmarinic Acid C4H low borderline
BjunContig7050045070 Rosmarinic Acid C4H low borderline
BjunContig781_1492275_15331450048530 Rosmarinic Acid C4H low borderline
BjunContig79250048730 Rosmarinic Acid C4H low borderline
BjunContig81270048900 Rosmarinic Acid C4H low borderline
BjunContig8310049470 Rosmarinic Acid C4H low borderline
BjunSuper_scaffold_120_122617_7993060055500 Rosmarinic Acid C4H low borderline
BjunSuper_scaffold_120_122617_7993060055820 Rosmarinic Acid C4H medium pass
BjunSuper_scaffold_184_753382_15810110061460 Rosmarinic Acid C4H low borderline
BjunSuper_scaffold_190_1654977_2549642_805423_8946660062290 Rosmarinic Acid C4H low borderline
BjunSuper_scaffold_28_1_2326914_1_4646450064350 Rosmarinic Acid C4H low borderline
BjunSuper_scaffold_40_2508543_4711922_1153965_22033800065770 Rosmarinic Acid C4H medium pass
BjunSuper_scaffold_5_1_6334723_245229_7451470068440 Rosmarinic Acid C4H medium pass
BjunSuper_scaffold_5_1_6334723_745148_63347230068620 Rosmarinic Acid C4H medium pass
BjunSuper_scaffold_5_1_6334723_745148_63347230068640 Rosmarinic Acid C4H medium pass