PlantSME Plant secondary metabolism enzyme database

Brassica juncea (brassica_juncea)

Imported from atlas release summary for Brassica juncea.

4298
Candidate Protein Records
3334
Pathway-Level Records
8339
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1088 19 BAHD (493) View species results
Alkaloid pathway 695 23 NMT (133) View species results
Phenylpropanoid pathway 689 11 POD (300) View species results
Flavonoid pathway 411 14 UFGT (250) View species results
Rosmarinic acid pathway 257 7 C4H (88) View species results
Steroid pathway 194 12 SMT1/SMT2/SMT3 (76) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
BjunContig501_1_1525584_15001_10356590037870 Rosmarinic Acid C4H low borderline
BjunContig50520038400 Rosmarinic Acid C4H low borderline
BjunContig5330039350 Rosmarinic Acid C4H low borderline
BjunContig668_1_4839870044000 Rosmarinic Acid C4H low borderline
BjunContig668_1_4839870044250 Rosmarinic Acid C4H low borderline
BjunContig7050045070 Rosmarinic Acid C4H low borderline
BjunContig781_1492275_15331450048530 Rosmarinic Acid C4H low borderline
BjunContig79250048730 Rosmarinic Acid C4H low borderline
BjunContig81270048900 Rosmarinic Acid C4H low borderline
BjunContig8310049470 Rosmarinic Acid C4H low borderline
BjunSuper_scaffold_120_122617_7993060055500 Rosmarinic Acid C4H low borderline
BjunSuper_scaffold_120_122617_7993060055820 Rosmarinic Acid C4H medium pass
BjunSuper_scaffold_184_753382_15810110061460 Rosmarinic Acid C4H low borderline
BjunSuper_scaffold_190_1654977_2549642_805423_8946660062290 Rosmarinic Acid C4H low borderline
BjunSuper_scaffold_28_1_2326914_1_4646450064350 Rosmarinic Acid C4H low borderline
BjunSuper_scaffold_40_2508543_4711922_1153965_22033800065770 Rosmarinic Acid C4H medium pass
BjunSuper_scaffold_5_1_6334723_245229_7451470068440 Rosmarinic Acid C4H medium pass
BjunSuper_scaffold_5_1_6334723_745148_63347230068620 Rosmarinic Acid C4H medium pass
BjunSuper_scaffold_5_1_6334723_745148_63347230068640 Rosmarinic Acid C4H medium pass
BjunSuper_scaffold_750071200 Rosmarinic Acid C4H low borderline
BjunSuper_scaffold_750071890 Rosmarinic Acid C4H low borderline
BjunA01G0005830 Rosmarinic Acid CPR medium pass
BjunA01G0012860 Rosmarinic Acid CPR medium pass
BjunA01G0012870 Rosmarinic Acid CPR medium pass
BjunA01G0019530 Rosmarinic Acid CPR low borderline
BjunA01G0022050 Rosmarinic Acid CPR medium pass
BjunA01G0029880 Rosmarinic Acid CPR medium pass
BjunA03G0019270 Rosmarinic Acid CPR low borderline
BjunA03G0026350 Rosmarinic Acid CPR medium pass
BjunA03G0040310 Rosmarinic Acid CPR medium pass
BjunA03G0044900 Rosmarinic Acid CPR medium pass
BjunA03G0047910 Rosmarinic Acid CPR medium pass
BjunA08G0014050 Rosmarinic Acid CPR medium pass
BjunA09G0007470 Rosmarinic Acid CPR low borderline
BjunA09G0033140 Rosmarinic Acid CPR medium pass
BjunB02G0001740 Rosmarinic Acid CPR low borderline
BjunB02G0001760 Rosmarinic Acid CPR low borderline
BjunB02G0046460 Rosmarinic Acid CPR medium pass
BjunB02G0050190 Rosmarinic Acid CPR medium pass
BjunB04G0016720 Rosmarinic Acid CPR low borderline
BjunB04G0031970 Rosmarinic Acid CPR low borderline
BjunB05G0007410 Rosmarinic Acid CPR medium pass
BjunB05G0007630 Rosmarinic Acid CPR medium pass
BjunB05G0011840 Rosmarinic Acid CPR medium pass
BjunB05G0021040 Rosmarinic Acid CPR medium pass
BjunB07G0012970 Rosmarinic Acid CPR low borderline
BjunB07G0018110 Rosmarinic Acid CPR medium pass
BjunB08G0023890 Rosmarinic Acid CPR low borderline
BjunB08G0043020 Rosmarinic Acid CPR medium pass
BjunContig32960026040 Rosmarinic Acid CPR medium pass